HHsearch alignment for GI: 254781101 and conserved domain: TIGR02764

>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB; InterPro: IPR014132 This entry describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reduced sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterised polysaccharide deacetylase; the exact function this protein family is unknown..
Probab=91.38  E-value=0.19  Score=28.79  Aligned_cols=155  Identities=14%  Similarity=0.137  Sum_probs=82.9

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEECCCC-CCCCHHHHHHHHHH
Q ss_conf             22222222333322103567651012103455431147664433101000365311331000256-53210125777874
Q gi|254781101|r  284 VHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKRYRCALNQGFFTLIDESYNA-NPASMKAAISVLSQ  362 (472)
Q Consensus       284 ~l~~~G~hnv~NalaAia~~~~lGi~~~~i~~~L~~~~~~~GR~~~~~~~~~~~~~~iIDDsYNA-nP~S~~aal~~l~~  362 (472)
T Consensus        24 IL~~L~~~~vk~ATFFlsG~Wae~hP-elvk~-lveI~---~~GH--EI--GsHgY~h~~--~~~l~~E~ikkd~~~a~~   92 (198)
T TIGR02764        24 ILDTLKEEDVKNATFFLSGSWAERHP-ELVKE-LVEIV---KDGH--EI--GSHGYRHKN--YTTLEDEKIKKDLLRAQE   92 (198)
T ss_pred             HHHHHHHCCCCCCCCEEEHHHHHCCH-HHHHH-HHHHH---HCCC--CC--CCCCCCCCC--CCCCCHHHHHHHHHHHHH
T ss_conf             76667655885333024315761277-89999-99998---4484--30--335421242--125876489999999888


Q ss_pred             HHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE--CCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHH
Q ss_conf             111026871388512354171058999999999986499899998--803898998511379799978989999999984
Q gi|254781101|r  363 ISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLYNISHVWLS--GFHVLALKDALPRSIHVHYSETMDGLFLFIQSS  440 (472)
Q Consensus       363 ~~~~~~~r~i~VlG~m~ELG~~~~~~h~~i~~~~~~~~~d~v~~~--G~~~~~~~~~~~~~~~~~~~~~~e~a~~~l~~~  440 (472)
T Consensus        93 ~i~~~~g~~p~LlRpP--~G~fn----~~~~~~ae~~GY~~V~WsWHvd-S~DWk-----------NPG~e~iv~~V~~~  154 (198)
T TIGR02764        93 IIEKLTGKKPTLLRPP--NGAFN----KAVLKLAESLGYTVVHWSWHVD-SLDWK-----------NPGVESIVDRVVKN  154 (198)
T ss_pred             HHHHHCCCCEEEEECC--CCCCC----HHHHHHHHHCCCCEEEEECCCC-CCCCC-----------CCCEEHHHHHHHCC
T ss_conf             8865105550165688--98604----6899999973991898624558-83545-----------78610001113312


Q ss_pred             CCCCCEEEEE-CCCHH-----HHHHHHHHHHHH
Q ss_conf             4789899997-71325-----489999999985
Q gi|254781101|r  441 LVDGDVVVVK-SSNSC-----GFYRLINLLLEE  467 (472)
Q Consensus       441 ~~~gdiVLiK-GSr~~-----~le~iv~~L~~~  467 (472)
T Consensus       155 ~~~GdIiL~HDASd~~KqT~~ALp~Ii~~LK~~  187 (198)
T TIGR02764       155 TKPGDIILLHDASDSAKQTVKALPEIIKKLKEK  187 (198)
T ss_pred             CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHC
T ss_conf             799856987634879744177899998998754