HHsearch alignment for GI: 254781101 and conserved domain: TIGR02782

>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=90.96  E-value=0.15  Score=29.46  Aligned_cols=71  Identities=30%  Similarity=0.351  Sum_probs=42.1

Q ss_pred             CCCCCEEEECC--CCCCCHH--------HHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCC
Q ss_conf             37898889716--8874768--------8899999869889998552124554469728995998999999999998306
Q gi|254781101|r   37 IAPQEAFFAIK--GPHYDGH--------DFILHAVQKGAGLVVVNTDMVASIGSLSIPVFGVDDVLGALNKLAVAARLRS  106 (472)
Q Consensus        37 v~~g~lFval~--g~~~DGh--------~~i~~A~~~Ga~~~i~~~~~~~~~~~~~~~~i~v~d~~~al~~la~~~~~~~  106 (472)
T Consensus        76 ivegEL--PldflGsRFeGl~PPVV~~p~F---~IRkkA~~vfTLDdYV~~g-------im---taaQ~d~l~~Av~ar~  140 (315)
T TIGR02782        76 IVEGEL--PLDFLGSRFEGLLPPVVEAPSF---AIRKKAVRVFTLDDYVEAG-------IM---TAAQRDVLREAVAARK  140 (315)
T ss_pred             EEEECC--CCCHHHCCCCCCCCCCCCCCCC---HHCCCCCCCCCCHHHHHHC-------CC---CHHHHHHHHHHHHHCC
T ss_conf             266107--5111201100468775565510---1110224104707776404-------45---5789999999997129


Q ss_pred             CCCEEEEECCCCCCHHH
Q ss_conf             99399983036542012
Q gi|254781101|r  107 KATIIAITGSVGKTTTK  123 (472)
Q Consensus       107 ~~~vI~ITGTnGKTTt~  123 (472)
T Consensus       141 NIlv~GGTGS-GKTTLa  156 (315)
T TIGR02782       141 NILVVGGTGS-GKTTLA  156 (315)
T ss_pred             CEEEECCCCC-CHHHHH
T ss_conf             8899814588-579999