HHsearch results for GI: 254781101 and protein with PDBid: 2f00_A

>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=100.00  E-value=0  Score=407.60  Aligned_cols=341  Identities=18%  Similarity=0.230  Sum_probs=265.1

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             69939998303654201233467777520112221221101457410001232214443015664433211212232322
Q gi|254781101|r  106 SKATIIAITGSVGKTTTKEMLTIALSSIKKTYACIGSYNNHIGVPLTLARMPVDVDFGIFELGMSHLGEIRFLTHLVRPH  185 (472)
Q Consensus       106 ~~~~vI~ITGTnGKTTt~~~l~~iL~~~~~~~~t~gn~Nn~iGvpltll~~~~~~~~~V~E~g~~~~gei~~L~~i~~P~  185 (472)
                      ...++||||||||||||++|++++|+..|......   ++-++.|+.......+.+++|+|++.++ ++.   .. ++|+
T Consensus       117 ~~~~~iaVTGTnGKTTtt~ml~~iL~~~g~~~~~~---~g~~~~~~~~~~~~~~~~~~V~E~s~~~-~~~---~~-~~p~  188 (491)
T 2f00_A          117 RFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFV---NGGLVKAAGVHARLGHGRYLIAEADESD-ASF---LH-LQPM  188 (491)
T ss_dssp             TTSEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEE---EEEEETTTTEEEECCSSSEEEEECCCTT-SGG---GG-CCCS
T ss_pred             HCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE---ECCCCCCHHHHHCCCCCCEEEEEECCCC-CCH---HC-CCCC
T ss_conf             05727999456782329999999999759993799---7164450244202589988999976640-130---11-4898


Q ss_pred             EEEEEEECCCHHHHH-HHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             025553121012344-4578888654331037622101210134246899875201233333222222222222234421
Q gi|254781101|r  186 IAVITTIAPAHLSNF-SGIEEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHALGIKTIYSFGKSKNADFQLRKWK  264 (472)
Q Consensus       186 iaiiTNI~~dHld~~-~s~e~i~~~K~~i~~~l~~~g~~ViN~Dd~~~~~l~~~~~~~~~~~i~~~g~~~~ad~~~~~i~  264 (472)
                      ++|||||++||||+| +|+|+|+++|.++++++++++.+|+|.||+.+..+......    .+++||....++++..++.
T Consensus       189 iavitNi~~DHld~~~~~~e~y~~~k~~i~~~~~~~~~~i~n~dd~~~~~~~~~~~~----~v~tfg~~~~~~~~~~~~~  264 (491)
T 2f00_A          189 VAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGR----QTTTYGFSEDADVRVEDYQ  264 (491)
T ss_dssp             EEEECCCCSCSGGGTTTCHHHHHHHHHHHHTTSCTTCEEEEETTSHHHHHHGGGCCS----EEEEEESSTTCSEEEEEEE
T ss_pred             EEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCC----CEEEEECCCCCCEECCCHH
T ss_conf             999977866775120688999999999999669958889997988899999875488----6378600111110012211


Q ss_pred             CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEE-----CCCCCC
Q ss_conf             1346510012-4565432212222222233332210356765101210345543114766443310100-----036531
Q gi|254781101|r  265 QCSEQSWMEV-QLQGKSMEVVHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKRYRC-----ALNQGF  338 (472)
Q Consensus       265 ~~~~~~~~~~-~~~~~~~~~~l~~~G~hnv~NalaAia~~~~lGi~~~~i~~~L~~~~~~~GR~~~~~~-----~~~~~~  338 (472)
                      ....+..+.. ........+.++++|.||++|+++|++++..+|++.+.|.++|.+|+++++|+|....     ....++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~l~l~G~HN~~NalAAia~a~~lGi~~e~I~~aL~~F~g~~~R~E~vg~~~~~~~~~~~~  344 (491)
T 2f00_A          265 QIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSG  344 (491)
T ss_dssp             EETTEEEEEEECTTSCCEEEEESSCSHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCCBTTSSEEEEEEESSSSSSCSS
T ss_pred             HCCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCC
T ss_conf             12566520110123433122103567201534999999999859957887766540478874148998742123423789


Q ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE-----------
Q ss_conf             133100025653210125777874111026871388512354171058999999999986499899998-----------
Q gi|254781101|r  339 FTLIDESYNANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLYNISHVWLS-----------  407 (472)
Q Consensus       339 ~~iIDDsYNAnP~S~~aal~~l~~~~~~~~~r~i~VlG~m~ELG~~~~~~h~~i~~~~~~~~~d~v~~~-----------  407 (472)
                      ..+|+|+||+||+|++++|++++.+.+  .+|+++++|  .++|.+...+|.++++.+.  .+|.+++.           
T Consensus       345 ~~~i~DdyahnP~si~a~l~al~~~~~--~~~ii~i~~--~~~~~~~~~~~~e~~~~l~--~aD~vil~~i~~a~e~~~~  418 (491)
T 2f00_A          345 TAMLVDDYGHHPTEVDATIKAARAGWP--DKNLVMLFQ--PHRFTRTRDLYDDFANVLT--QVDTLLMLEVYPAGEAPIP  418 (491)
T ss_dssp             EEEEEEECCCSHHHHHHHHHHHHTTCC--SSEEEEEEC--CBCHHHHTTTHHHHHHHHT--TSSEEEECCCBCSSSCCCT
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHCC--CCEEEEEEC--CCCCCCHHHHHHHHHHHHH--HCCEEEECCCCCCCCCCCC
T ss_conf             789998467895899999999996589--976999976--7787247999999999998--6999999666688666445


Q ss_pred             CCCHHHHHHHCCCC--CCEEEECCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             80389899851137--979997898999999998447898999977132548999999998
Q gi|254781101|r  408 GFHVLALKDALPRS--IHVHYSETMDGLFLFIQSSLVDGDVVVVKSSNSCGFYRLINLLLE  466 (472)
Q Consensus       408 G~~~~~~~~~~~~~--~~~~~~~~~e~a~~~l~~~~~~gdiVLiKGSr~~~le~iv~~L~~  466 (472)
                      |.....+.+.+...  .++.++++.+++++.+.+.+++||+||+|||++  ++++.+.|.|
T Consensus       419 g~~~~~l~~~i~~~~~~~~~~~~~~~ea~~~l~~~~~~gDvVL~~Gsg~--i~~~~~~l~e  477 (491)
T 2f00_A          419 GADSRSLCRTIRGRGKIDPILVPDPARVAEMLAPVLTGNDLILVQGAGN--IGKIARSLAE  477 (491)
T ss_dssp             TSSHHHHTTC-------CCEECCCSSCCHHHHGGGCCSEEEEEEECSTT--HHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCC--HHHHHHHHHH
T ss_conf             8599999999985599897997999999999997589989999988998--8899999999