HHsearch results for GI: 254781101 and protein with PDBid: 2f00_A
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=100.00 E-value=0 Score=407.60 Aligned_cols=341 Identities=18% Similarity=0.230 Sum_probs=265.1
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 69939998303654201233467777520112221221101457410001232214443015664433211212232322
Q gi|254781101|r 106 SKATIIAITGSVGKTTTKEMLTIALSSIKKTYACIGSYNNHIGVPLTLARMPVDVDFGIFELGMSHLGEIRFLTHLVRPH 185 (472)
Q Consensus 106 ~~~~vI~ITGTnGKTTt~~~l~~iL~~~~~~~~t~gn~Nn~iGvpltll~~~~~~~~~V~E~g~~~~gei~~L~~i~~P~ 185 (472)
...++||||||||||||++|++++|+..|...... ++-++.|+.......+.+++|+|++.++ ++. .. ++|+
T Consensus 117 ~~~~~iaVTGTnGKTTtt~ml~~iL~~~g~~~~~~---~g~~~~~~~~~~~~~~~~~~V~E~s~~~-~~~---~~-~~p~ 188 (491)
T 2f00_A 117 RFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFV---NGGLVKAAGVHARLGHGRYLIAEADESD-ASF---LH-LQPM 188 (491)
T ss_dssp TTSEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEE---EEEEETTTTEEEECCSSSEEEEECCCTT-SGG---GG-CCCS
T ss_pred HCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE---ECCCCCCHHHHHCCCCCCEEEEEECCCC-CCH---HC-CCCC
T ss_conf 05727999456782329999999999759993799---7164450244202589988999976640-130---11-4898
Q ss_pred EEEEEEECCCHHHHH-HHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 025553121012344-4578888654331037622101210134246899875201233333222222222222234421
Q gi|254781101|r 186 IAVITTIAPAHLSNF-SGIEEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHALGIKTIYSFGKSKNADFQLRKWK 264 (472)
Q Consensus 186 iaiiTNI~~dHld~~-~s~e~i~~~K~~i~~~l~~~g~~ViN~Dd~~~~~l~~~~~~~~~~~i~~~g~~~~ad~~~~~i~ 264 (472)
++|||||++||||+| +|+|+|+++|.++++++++++.+|+|.||+.+..+...... .+++||....++++..++.
T Consensus 189 iavitNi~~DHld~~~~~~e~y~~~k~~i~~~~~~~~~~i~n~dd~~~~~~~~~~~~----~v~tfg~~~~~~~~~~~~~ 264 (491)
T 2f00_A 189 VAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGR----QTTTYGFSEDADVRVEDYQ 264 (491)
T ss_dssp EEEECCCCSCSGGGTTTCHHHHHHHHHHHHTTSCTTCEEEEETTSHHHHHHGGGCCS----EEEEEESSTTCSEEEEEEE
T ss_pred EEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCC----CEEEEECCCCCCEECCCHH
T ss_conf 999977866775120688999999999999669958889997988899999875488----6378600111110012211
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEE-----CCCCCC
Q ss_conf 1346510012-4565432212222222233332210356765101210345543114766443310100-----036531
Q gi|254781101|r 265 QCSEQSWMEV-QLQGKSMEVVHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKRYRC-----ALNQGF 338 (472)
Q Consensus 265 ~~~~~~~~~~-~~~~~~~~~~l~~~G~hnv~NalaAia~~~~lGi~~~~i~~~L~~~~~~~GR~~~~~~-----~~~~~~ 338 (472)
....+..+.. ........+.++++|.||++|+++|++++..+|++.+.|.++|.+|+++++|+|.... ....++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~l~G~HN~~NalAAia~a~~lGi~~e~I~~aL~~F~g~~~R~E~vg~~~~~~~~~~~~ 344 (491)
T 2f00_A 265 QIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSG 344 (491)
T ss_dssp EETTEEEEEEECTTSCCEEEEESSCSHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCCBTTSSEEEEEEESSSSSSCSS
T ss_pred HCCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCC
T ss_conf 12566520110123433122103567201534999999999859957887766540478874148998742123423789
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE-----------
Q ss_conf 133100025653210125777874111026871388512354171058999999999986499899998-----------
Q gi|254781101|r 339 FTLIDESYNANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLYNISHVWLS----------- 407 (472)
Q Consensus 339 ~~iIDDsYNAnP~S~~aal~~l~~~~~~~~~r~i~VlG~m~ELG~~~~~~h~~i~~~~~~~~~d~v~~~----------- 407 (472)
..+|+|+||+||+|++++|++++.+.+ .+|+++++| .++|.+...+|.++++.+. .+|.+++.
T Consensus 345 ~~~i~DdyahnP~si~a~l~al~~~~~--~~~ii~i~~--~~~~~~~~~~~~e~~~~l~--~aD~vil~~i~~a~e~~~~ 418 (491)
T 2f00_A 345 TAMLVDDYGHHPTEVDATIKAARAGWP--DKNLVMLFQ--PHRFTRTRDLYDDFANVLT--QVDTLLMLEVYPAGEAPIP 418 (491)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTTCC--SSEEEEEEC--CBCHHHHTTTHHHHHHHHT--TSSEEEECCCBCSSSCCCT
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCC--CCEEEEEEC--CCCCCCHHHHHHHHHHHHH--HCCEEEECCCCCCCCCCCC
T ss_conf 789998467895899999999996589--976999976--7787247999999999998--6999999666688666445
Q ss_pred CCCHHHHHHHCCCC--CCEEEECCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 80389899851137--979997898999999998447898999977132548999999998
Q gi|254781101|r 408 GFHVLALKDALPRS--IHVHYSETMDGLFLFIQSSLVDGDVVVVKSSNSCGFYRLINLLLE 466 (472)
Q Consensus 408 G~~~~~~~~~~~~~--~~~~~~~~~e~a~~~l~~~~~~gdiVLiKGSr~~~le~iv~~L~~ 466 (472)
|.....+.+.+... .++.++++.+++++.+.+.+++||+||+|||++ ++++.+.|.|
T Consensus 419 g~~~~~l~~~i~~~~~~~~~~~~~~~ea~~~l~~~~~~gDvVL~~Gsg~--i~~~~~~l~e 477 (491)
T 2f00_A 419 GADSRSLCRTIRGRGKIDPILVPDPARVAEMLAPVLTGNDLILVQGAGN--IGKIARSLAE 477 (491)
T ss_dssp TSSHHHHTTC-------CCEECCCSSCCHHHHGGGCCSEEEEEEECSTT--HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCC--HHHHHHHHHH
T ss_conf 8599999999985599897997999999999997589989999988998--8899999999