HHsearch results for GI: 254781101 and protein with PDBid: 3hn7_A
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; YP_263340.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=0 Score=394.94 Aligned_cols=350 Identities=18% Similarity=0.177 Sum_probs=250.8
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC-CHH----------HH------HCCCCCCCHHCCCCCCCHHHHHCCCC
Q ss_conf 99399983036542012334677775201122-212----------21------10145741000123221444301566
Q gi|254781101|r 107 KATIIAITGSVGKTTTKEMLTIALSSIKKTYA-CIG----------SY------NNHIGVPLTLARMPVDVDFGIFELGM 169 (472)
Q Consensus 107 ~~~vI~ITGTnGKTTt~~~l~~iL~~~~~~~~-t~g----------n~------Nn~iGvpltll~~~~~~~~~V~E~g~ 169 (472)
..++||||||||||||+.|++++|+..|.... ..| +. +..+|.+..........+|+|+|++.
T Consensus 121 ~~~vI~VTGTnGKTTTt~mi~~iL~~~g~~~~~~iGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~E~~e 200 (524)
T 3hn7_A 121 SRHVIAVAGTHGKTTTTTMLAWILHYAGIDAGFLIGGVPLVNTTDTNLQQVFAHSSYLGTEKDDSDNSVNTGYFVIEADE 200 (524)
T ss_dssp GSEEEEEECSSCHHHHHHHHHHHHHHTTCCCEEECSCCBCCCSSCHHHHHHTTSSEECCCCCCSSCTTCCCCEEEEECCS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf 58289997888825389999999997299862997570345776643356778733430134455402468879999844
Q ss_pred CC--CCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCC-----
Q ss_conf 44--33211212232322025553121012344457888865433103762210121013424689987520123-----
Q gi|254781101|r 170 SH--LGEIRFLTHLVRPHIAVITTIAPAHLSNFSGIEEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHAL----- 242 (472)
Q Consensus 170 ~~--~gei~~L~~i~~P~iaiiTNI~~dHld~~~s~e~i~~~K~~i~~~l~~~g~~ViN~Dd~~~~~l~~~~~~~----- 242 (472)
++ +++.......++|+++|||||++||||+|+|+|+|+++|.++++.++++|.+|+|.||+.+.....+....
T Consensus 201 ~~~s~~~~~~~~~~~~p~iaviTNI~~DHLd~~~s~e~~~~ak~~i~~~~~~~g~~V~n~dd~~~~~~~~~~~~~~~~~~ 280 (524)
T 3hn7_A 201 YDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFADLDAIQTQFHHMVRMIPSTGKIIMPAATISLEDTLAKGVWTPIWRT 280 (524)
T ss_dssp CCCBTTBCCCHHHHCCCSEEEECCCCCC------CHHHHHHHHHHHHTTSCTTSEEEEESSCHHHHHHHHTCCCSCEEEE
T ss_pred CCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCC
T ss_conf 43014552000144467689997477867323330355566777787428878854753404569999998764310343
Q ss_pred ------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf ------------3333222222222222234421134651001245654-322122222222333322103567651012
Q gi|254781101|r 243 ------------GIKTIYSFGKSKNADFQLRKWKQCSEQSWMEVQLQGK-SMEVVHHGIGYHMAQNMLMTLGIVSILTAD 309 (472)
Q Consensus 243 ------------~~~~i~~~g~~~~ad~~~~~i~~~~~~~~~~~~~~~~-~~~~~l~~~G~hnv~NalaAia~~~~lGi~ 309 (472)
....+.+++....+||++..+........|.+...+. ...+.++++|.||++|+++|+++|..+|++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~l~G~hNv~NalaAia~a~~lGi~ 360 (524)
T 3hn7_A 281 SVIDSTISSVRREDSPLENSQAENSSDWQAELISADGSQFTVSFNDNKEATALVNWSMSGLHNVNNALVAIAAAYNIGVS 360 (524)
T ss_dssp EEEC-------------------CCCSEEEEEEETTTTEEEEEETTEEEEEEEEECSCCSHHHHHHHHHHHHHHHHTTCC
T ss_pred CEEECCCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 11110111111346530220355465499999985487135643115640478983577719999999999999971996
Q ss_pred CHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHH--
Q ss_conf 103455431147664433101000365311331000256532101257778741110268713885123541710589--
Q gi|254781101|r 310 VDTAIKALSVFHPKEGRGKRYRCALNQGFFTLIDESYNANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQS-- 387 (472)
Q Consensus 310 ~~~i~~~L~~~~~~~GR~~~~~~~~~~~~~~iIDDsYNAnP~S~~aal~~l~~~~~~~~~r~i~VlG~m~ELG~~~~~-- 387 (472)
.+.|.++|++|++++||+|++. ..++++|+|| |||||+||+++|++++.+.+ .+|.|+|++ +|.++..
T Consensus 361 ~~~i~~~L~~f~g~~~R~e~i~---~~~~~~viDD-YahnP~si~a~l~al~~~~~--~~rii~v~~----~~~~s~~~~ 430 (524)
T 3hn7_A 361 VKTACAALSAFAGIKRRMELIG---DVNDILVFDD-FAHHPTAITTTLDGAKKKLA--DRRLWAIIE----PRSNTMKMG 430 (524)
T ss_dssp HHHHHHHHHTCCCBTTSSEEEE---EETTEEEEEE-CCCSHHHHHHHHHHHHHHHT--TSCEEEEEE----CCCCSSCCS
T ss_pred HHEEEECCCCCCCCHHHHEEEE---ECCCCEEEEE-CCCCHHHHHHHHHHHHHHCC--CCEEEEEEC----CCCCCCHHH
T ss_conf 0402220004677332403564---0478159973-47998999999999997669--985999988----899842134
Q ss_pred HHHHHHHHHHHCCCCEEEEEC-----CCHHHHHH----HCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCH--HH
Q ss_conf 999999999864998999988-----03898998----51137979997898999999998447898999977132--54
Q gi|254781101|r 388 FHIDLAEVLSLYNISHVWLSG-----FHVLALKD----ALPRSIHVHYSETMDGLFLFIQSSLVDGDVVVVKSSNS--CG 456 (472)
Q Consensus 388 ~h~~i~~~~~~~~~d~v~~~G-----~~~~~~~~----~~~~~~~~~~~~~~e~a~~~l~~~~~~gdiVLiKGSr~--~~ 456 (472)
.+.+....+.. ..|.+++.. +......+ ......+..+++++++|++.+.+.+++||+||+.|+.+ .-
T Consensus 431 ~~~~~~~~~~~-~aD~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eai~~~~~~a~~gDiVLi~G~G~~~~i 509 (524)
T 3hn7_A 431 IHQDSLAQSAT-LADHTLWYEPTGLEWGLKEVIDNATIANPSIGSQQVLSSVDDIIKHICTHAKAGDAIVIMSNGGFEGI 509 (524)
T ss_dssp CCTTHHHHHTT-TSSEEEEECCTTCCCSHHHHHHHHHHHCGGGCCEEEESCHHHHHHHHHHHCCTTCEEEEEESSCGGGH
T ss_pred HHHHHHHHHHH-HCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHH
T ss_conf 66899999997-49999997888766487878879987434578849989999999999985799899999879976589
Q ss_pred HHHHHHHHHHH
Q ss_conf 89999999985
Q gi|254781101|r 457 FYRLINLLLEE 467 (472)
Q Consensus 457 le~iv~~L~~~ 467 (472)
-++++++|.+.
T Consensus 510 ~~~ll~~L~~~ 520 (524)
T 3hn7_A 510 HQRLLTALGNI 520 (524)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHCH
T ss_conf 99999987343