PSIBLAST alignment of GI: 254781101 and protein with PDB id: 1e8c
>gi|15988379|pdb|1E8C|A Chain A, Structure Of Mure The Udp-N-Acetylmuramyl Tripeptide Synthetase From E. Coli Length = 498
>gi|15988380|pdb|1E8C|B Chain B, Structure Of Mure The Udp-N-Acetylmuramyl Tripeptide Synthetase From E. Coli Length = 498
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 73/478 (15%), Positives = 143/478 (29%), Gaps = 47/478 (9%)
Query: 6 TFHDLLQAIQGHSIGIVPQGFVNGISIDSRSIAPQEAFFAIKGPHYDGHDFILHAVQKGA 65
DLL + P + ++DSR A + F A+ G DG +I A+ +G
Sbjct: 4 NLRDLL----APWVPDAPSRALREXTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGV 59
Query: 66 GLVVVNTDMVASIGSL----SIPVFGVDDVLGALNKLAVAARLRS--KATIIAITGSVGK 119
++ A+ G + +PV + + L+ LA ++ +TG+ GK
Sbjct: 60 AAIIAEAKDEATDGEIREXHGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGK 119
Query: 120 TTTKEMLTIALSSI-KKTYACIGSYNNHIGVPLTLARMPVDVDFGIFEL----------- 167
TTT ++L + + + N +G + EL
Sbjct: 120 TTTTQLLAQWSQLLGEISAVXGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQGATFC 179
Query: 168 --GMSHLGEIRFLTHLVRPHIAVITTIAPAHLSNFSGIEEIASAKAEIFEGLEKTGTIFL 225
+S G ++ ++ +V T ++ HL E +A ++ I
Sbjct: 180 AXEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDXEHYEAAXWLLYSEHHCGQAIIN 239
Query: 226 NYDDSFFELLKAKSHALGIKTIYSFGKSKNADF-QLRKWKQCSEQSWMEVQLQGKSMEVV 284
D+ L A+ + + + + + + + + E+
Sbjct: 240 ADDEVGRRWLAKLPDAVAVSXEDHINPNCHGRWLKATEVNYHDSGATIRFSSSWGDGEIE 299
Query: 285 HHGIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKRYRCALNQGFFTLIDE 344
H G N+L+ L + L + +K + P GR + +
Sbjct: 300 SHLXGAFNVSNLLLALATLLALGYPLADLLKTAARLQPVCGRXEVFTAPGKPTVVVDYAH 359
Query: 345 SYNANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLYNISHV 404
+ +A L H G+ V G G L ++
Sbjct: 360 TPDA-------LEKALQAARLHCAGKLWCVFG----CGGDRDKGKRPLXGAIAEEFADVA 408
Query: 405 WLSGFHVL---------ALKDALPRSIHVHYSETMDGLFLFIQSSLVDGDVVVV--KS 451
++ + + + H E + DVV+V K
Sbjct: 409 VVTDDNPRTEEPRAIINDILAGXLDAGHAKVXEGRAEAVTCAVXQAKENDVVLVAGKG 466