PSIBLAST alignment of GI: 254781101 and protein with PDB id: 1p31
>gi|34811495|pdb|1P31|A Chain A, Crystal Structure Of Udp-N-Acetylmuramic Acid:l-Alanine Ligase (Murc) From Haemophilus Influenzae Length = 475
>gi|34811496|pdb|1P31|B Chain B, Crystal Structure Of Udp-N-Acetylmuramic Acid:l-Alanine Ligase (Murc) From Haemophilus Influenzae Length = 475
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 72/416 (17%), Positives = 139/416 (33%), Gaps = 50/416 (12%)
Query: 56 FILHAVQK--GAGLVVVNTDMVASIGS------LSIPVFGVDDVLGALNKLAVAARLRSK 107
+I HA + GA +VVV++ + IPV A LA R R
Sbjct: 67 YIGHAEEHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQ-----RA-QXLAEIXRFRHG 120
Query: 108 ATIIAITGSVGKTTTKEMLTIALSSIKKTYACIGSYNNHIGVPLTLARMPVDVDFGIFEL 167
IA+ G+ GKTTT ++ + K + + I E
Sbjct: 121 ---IAVAGTHGKTTTTAXISXIYTQAKLDPTFVNGGLVKS---AGKNAHLGASRYLIAEA 174
Query: 168 GMSHLGEIRFLTHLVRPHIAVITTIAPAHLSNF-SGIEEIASAKAEIFEGLEKTGTIFLN 226
S + ++P ++V+T P H + E+ + + L G
Sbjct: 175 DESDASFLH-----LQPXVSVVTNXEPDHXDTYEGDFEKXKATYVKFLHNLPFYGLAVXC 229
Query: 227 YDDSFFELLKAKSHALGIKTIYSFGKSKNADFQLRKWKQC-SEQSWMEVQLQGKSMEVVH 285
DD L K + + ++G S+ AD+++ ++Q + + + + + V+
Sbjct: 230 ADDPVLXELVPKV----GRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLL 285
Query: 286 HGIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKRYRCALNQGFFTLIDES 345
+ G H A N L + + ++AL+ F R + + + +
Sbjct: 286 NVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDD 345
Query: 346 YNANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLYNISHVW 405
Y +P + I + G G + V ++ D +VLS + +
Sbjct: 346 YGHHPTEVGVTIKA----AREGWGDKRIVXIFQPHRYSRTRDLFDDFVQVLSQ--VDALI 399
Query: 406 -----------LSGFHVLALKDALPRSIHV--HYSETMDGLFLFIQSSLVDGDVVV 448
+ G +L ++ V L + + DGD+++
Sbjct: 400 XLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLIL 455