RPSBLAST alignment for GI: 254781101 and conserved domain: PRK11929

>gnl|CDD|183385 PRK11929, PRK11929, putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase; Provisional. Length = 958
 Score =  292 bits (749), Expect = 1e-79
 Identities = 139/447 (31%), Positives = 209/447 (46%), Gaps = 22/447 (4%)

Query: 27  VNGISIDSRSIAPQEAFFAIKGPHYDGHDFILHAVQKGAGLVVVNTDMVASIGSLSIPVF 86
              +S DSRS+   E F A++G ++DGHD++  A   GA   VV       +  + +P  
Sbjct: 526 AGAVSTDSRSVGRGELFVALRGENFDGHDYLPQAFAAGACAAVVER----QVADVDLPQI 581

Query: 87  GVDDVLGALNKLAVAARLRSKATIIAITGSVGKTTTKEMLTIALSSIKKTY---ACIGSY 143
            VDD   AL +LA A R R    ++AITGS GKTTTKEM+   L++ +      A  G++
Sbjct: 582 VVDDTRAALGRLATAWRARFSLPVVAITGSNGKTTTKEMIAAILAAWQGEDRVLATEGNF 641

Query: 144 NNHIGVPLTLARMPVDVDFGIFELGMSHLGEIRFLTHLVRPHIAVITTIAPAHLSNFSGI 203
           NN IGVPLTL R+       +FELGM+H GEI +L  +  P +A++T     H      +
Sbjct: 642 NNEIGVPLTLLRLRAQHRAAVFELGMNHPGEIAYLAAIAAPTVALVTNAQREHQEFMHSV 701

Query: 204 EEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHALGIKTIYSFGKSKNADFQLRKW 263
           E +A AK EI   L + G   +N DD +  +        G + +  FG    AD    K 
Sbjct: 702 EAVARAKGEIIAALPEDGVAVVNGDDPYTAIWAK---LAGARRVLRFGLQPGADVYAEKI 758

Query: 264 KQCSE-----QSWMEVQLQGKSMEVVHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALS 318
            +         +  +V     S EV    IG H  +N L  +       A +      L 
Sbjct: 759 AKDISVGEAGGTRCQVVTPAGSAEVYLPLIGEHNLRNALAAIACALAAGASLKQIRAGLE 818

Query: 319 VFHPKEGRGKRYRCALNQGFFTLIDESYNANPASMKAAISVLSQISPHGEGRRIAVLGDM 378
            F P  GR +R R +       +ID++YNANP SM+AAI VL+++     G R  VLGDM
Sbjct: 819 RFQPVAGRMQRRRLSCG---TRIIDDTYNANPDSMRAAIDVLAELP---NGPRALVLGDM 872

Query: 379 CEMGELSQSFHIDLAEVLSLYNISHVWLSGFHVLALKDALPRSIHVHYSETMDGLFLFIQ 438
            E+G+   + H ++ +      I  +   G        A           ++D +   ++
Sbjct: 873 LELGDNGPAMHREVGKYARQLGIDALITLGEAARDAAAAFGAGARGVC-ASVDEIIAALR 931

Query: 439 SSLVDGDVVVVKSSNSCGFYRLINLLL 465
            +L +GD V++K S      R+++ L 
Sbjct: 932 GALPEGDSVLIKGSRFMRLERVVDALS 958