RPSBLAST alignment for GI: 254781101 and conserved domain: PRK11929
>gnl|CDD|183385 PRK11929, PRK11929, putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase; Provisional. Length = 958
Score = 292 bits (749), Expect = 1e-79
Identities = 139/447 (31%), Positives = 209/447 (46%), Gaps = 22/447 (4%)
Query: 27 VNGISIDSRSIAPQEAFFAIKGPHYDGHDFILHAVQKGAGLVVVNTDMVASIGSLSIPVF 86
+S DSRS+ E F A++G ++DGHD++ A GA VV + + +P
Sbjct: 526 AGAVSTDSRSVGRGELFVALRGENFDGHDYLPQAFAAGACAAVVER----QVADVDLPQI 581
Query: 87 GVDDVLGALNKLAVAARLRSKATIIAITGSVGKTTTKEMLTIALSSIKKTY---ACIGSY 143
VDD AL +LA A R R ++AITGS GKTTTKEM+ L++ + A G++
Sbjct: 582 VVDDTRAALGRLATAWRARFSLPVVAITGSNGKTTTKEMIAAILAAWQGEDRVLATEGNF 641
Query: 144 NNHIGVPLTLARMPVDVDFGIFELGMSHLGEIRFLTHLVRPHIAVITTIAPAHLSNFSGI 203
NN IGVPLTL R+ +FELGM+H GEI +L + P +A++T H +
Sbjct: 642 NNEIGVPLTLLRLRAQHRAAVFELGMNHPGEIAYLAAIAAPTVALVTNAQREHQEFMHSV 701
Query: 204 EEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHALGIKTIYSFGKSKNADFQLRKW 263
E +A AK EI L + G +N DD + + G + + FG AD K
Sbjct: 702 EAVARAKGEIIAALPEDGVAVVNGDDPYTAIWAK---LAGARRVLRFGLQPGADVYAEKI 758
Query: 264 KQCSE-----QSWMEVQLQGKSMEVVHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALS 318
+ + +V S EV IG H +N L + A + L
Sbjct: 759 AKDISVGEAGGTRCQVVTPAGSAEVYLPLIGEHNLRNALAAIACALAAGASLKQIRAGLE 818
Query: 319 VFHPKEGRGKRYRCALNQGFFTLIDESYNANPASMKAAISVLSQISPHGEGRRIAVLGDM 378
F P GR +R R + +ID++YNANP SM+AAI VL+++ G R VLGDM
Sbjct: 819 RFQPVAGRMQRRRLSCG---TRIIDDTYNANPDSMRAAIDVLAELP---NGPRALVLGDM 872
Query: 379 CEMGELSQSFHIDLAEVLSLYNISHVWLSGFHVLALKDALPRSIHVHYSETMDGLFLFIQ 438
E+G+ + H ++ + I + G A ++D + ++
Sbjct: 873 LELGDNGPAMHREVGKYARQLGIDALITLGEAARDAAAAFGAGARGVC-ASVDEIIAALR 931
Query: 439 SSLVDGDVVVVKSSNSCGFYRLINLLL 465
+L +GD V++K S R+++ L
Sbjct: 932 GALPEGDSVLIKGSRFMRLERVVDALS 958