RPSBLAST alignment for GI: 254781101 and conserved domain: PRK11929
>gnl|CDD|183385 PRK11929, PRK11929, putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase; Provisional. Length = 958
Score = 122 bits (309), Expect = 1e-28
Identities = 98/391 (25%), Positives = 157/391 (40%), Gaps = 38/391 (9%)
Query: 10 LLQAIQGHSIGIVPQGFVNGISIDSRSIAPQEAFFAIKGPHYDGHDFILHAVQKGAGLVV 69
LLQA+ + + +DSR + P + F A +G DG FI A+ +GA V+
Sbjct: 15 LLQALAWLRGCVAA---TADLRLDSREVQPGDLFVACRGAASDGRAFIDQALARGAAAVL 71
Query: 70 VNTDMVASIGSLSIPVFGVDDVLGALNKLAVA--ARLRSKATIIAITGSVGKTTTKEMLT 127
V + + + V V D+ AL +LA R + +++A+TG+ GKT+ ++L
Sbjct: 72 VEAEGEDQVAAADALVLPVADLRKALGELAARWYGRPSEQLSLVAVTGTNGKTSCAQLLA 131
Query: 128 IALSSIKKTYACIGSYNNH-----IGVPLT----------LARMPVD-VDFGIFE----- 166
L+ + K IG+ I LT LARM D E
Sbjct: 132 QLLTRLGKPCGSIGTLGARLDGRLIPGSLTTPDAIILHRILARMRAAGADAVAMEASSHG 191
Query: 167 LGMSHLGEIRFLTHLVRPHIAVITTIAPAHLSNFSGIEEIASAKAEIFEGLEKTGTIFLN 226
L L +R +A T + HL +++ AKA +F L G +N
Sbjct: 192 LEQGRLDGLRI-------AVAGFTNLTRDHLDYHGTMQDYEEAKAALFSKLPGLGAAVIN 244
Query: 227 YDDSFFELLKAKSHALGIKTIYSFGKSKNADFQLRKWKQCSEQSWMEVQLQGKSMEVVHH 286
DD L A G+K YS + AD Q R + + + S ++V
Sbjct: 245 ADDPAAARLLAA-LPRGLKVGYSPQNAG-ADVQARDLRATAHGQVFTLATPDGSYQLVTR 302
Query: 287 GIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKR-YRCALNQGFFTLIDES 345
+G N+L+ + L + +AL+ P GR +R A QG ++D
Sbjct: 303 LLGRFNVSNLLLVAAALKKLGLPLAQIARALAAVSPVPGRMERVGPTAGAQGPLVVVD-- 360
Query: 346 YNANPASMKAAISVLSQISPHGEGRRIAVLG 376
Y P ++ A++ L ++ GR + V G
Sbjct: 361 YAHTPDALAKALTALRPVAQARNGRLVCVFG 391