RPSBLAST alignment for GI: 254781101 and conserved domain: PRK11930
>gnl|CDD|183386 PRK11930, PRK11930, putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Provisional. Length = 822
Score = 180 bits (459), Expect = 6e-46
Identities = 110/467 (23%), Positives = 198/467 (42%), Gaps = 25/467 (5%)
Query: 6 TFHDLLQAIQGHSIGIVPQGFVNGISIDSRSI--APQEAFFAIKGPHYDGHDFILHAVQK 63
T + + +G ++ I DSRS+ FFA+KG DGH +I +K
Sbjct: 4 TLESISGILGAEGLGDKDA-IIDQILTDSRSLSFPENTLFFALKGERNDGHRYIQELYEK 62
Query: 64 GAGLVVVNTDMVASIGSLSIPVF-GVDDVLGALNKLAVAARLRSKATIIAITGSVGKTTT 122
G VV+ + S F V D L AL +LA R + +I ITGS GKT
Sbjct: 63 GVRNFVVS-EEKHPEESYPDANFLKVKDPLKALQELAAYHRSQFDIPVIGITGSNGKTIV 121
Query: 123 KEMLTIALSSIKKTYACIGSYNNHIGVPLTLARMPVDVDFGIFELGMSHLGEIRFLTHLV 182
KE L LS SYN+ IGVPL++ ++ + + GIFE G+S GE+ L ++
Sbjct: 122 KEWLYQLLSPDYNIVRSPRSYNSQIGVPLSVWQLNEEHELGIFEAGISQPGEMEALQKII 181
Query: 183 RPHIAVITTIAPAHLSNFSGIEEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHAL 242
+P I ++T I AH NF I++ K ++F+ + + + + L
Sbjct: 182 KPTIGILTNIGGAHQENFRSIKQKIMEKLKLFKDCDVIIYN-GDNELISSCI---TKSNL 237
Query: 243 GIKTIYSFGKSKNADFQLRKWKQCSEQSWMEVQLQGKSMEVVHHGIGYHMAQNMLMTLGI 302
+K I K A + ++ + + + +G+ I +N++ + +
Sbjct: 238 TLKLISWSRKDPEAPLYIPFVEKKEDHTVISYTYKGEDFHFEIPFIDDASIENLIHCIAV 297
Query: 303 VSILTADVDTAIKALSVFHPKEGR-----GKRYRCALNQGFFTLIDESYNANPASMKAAI 357
+ L D + ++ P R G C TLI++SYN++ S+ A+
Sbjct: 298 LLYLGYSADQIQERMARLEPVAMRLEVKEGIN-NC-------TLINDSYNSDLQSLDIAL 349
Query: 358 SVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLYNISHVWLSGFHVLALKDA 417
L++ S ++ +L D+ + G+ + + +A+++S I + G + +
Sbjct: 350 DFLNRRSQS--KKKTLILSDILQSGQSPEELYRKVAQLISKRGIDRLIGIGEEISSEASK 407
Query: 418 LPRSIHVHYSETMDGLFLFIQSSLVDGDVVVVKSSNSCGFYRLINLL 464
+ + T L F + ++++VK + F ++ LL
Sbjct: 408 FEGTEKEFFKTTEAFLKSFAFLKFRN-ELILVKGARKFEFEQITELL 453