RPSBLAST alignment of GI: 254781101 and protein with PDBid: 1p3d

>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A* Length = 475

 Score =  134 bits (337), Expect = 6e-32
 Identities = 71/424 (16%), Positives = 147/424 (34%), Gaps = 44/424 (10%)

Query: 63  KGAGLVVVNTDM------VASIGSLSIPVFGVDDVLGALNKLAVAARLRSKATIIAITGS 116
           +GA +VVV++ +      + +     IPV     +L         A +      IA+ G+
Sbjct: 76  EGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQML---------AEIMRFRHGIAVAGT 126

Query: 117 VGKTTTKEMLTIALSSIKKTYACIGSYNNHIGVPLTLARMPVDVDFGIFELGMSHLGEIR 176
            GKTTT  M+++  +  K     +      +      A +     + I E   S    + 
Sbjct: 127 HGKTTTTAMISMIYTQAKLDPTFVN--GGLVKSAGKNAHLGAS-RYLIAEADESDASFLH 183

Query: 177 FLTHLVRPHIAVITTIAPAHL-SNFSGIEEIASAKAEIFEGLEKTGTIFLNYDDSFFELL 235
                 +P ++V+T + P H+ +     E++ +   +    L   G   +  DD     L
Sbjct: 184 L-----QPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMEL 238

Query: 236 KAKSHALGIKTIYSFGKSKNADFQLRKWKQCSEQSWMEVQLQGKSMEVVHHGI-GYHMAQ 294
             K      + + ++G S+ AD+++  ++Q   Q    V         V   + G H A 
Sbjct: 239 VPKVG----RQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNAL 294

Query: 295 NMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKRYRCALNQGFFTLIDESYNANPASMK 354
           N    L +        +  ++AL+ F     R  +    +       + + Y  +P  + 
Sbjct: 295 NATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVG 354

Query: 355 AAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFH--------IDLAEVLSLYNISHVWL 406
             I    +       +RI ++            F         +D   +L +Y      +
Sbjct: 355 VTIKAAREGWG---DKRIVMIFQPHRYSRTRDLFDDFVQVLSQVDALIMLDVYAAGEAPI 411

Query: 407 SGFHVLALKDALPR--SIHVHYSETMDGLFLFIQSSLVDGDVVVVKSSNSCGFYRLINLL 464
            G    +L  ++     +          L   +   + DGD+++ + + S    ++   L
Sbjct: 412 VGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGS--VSKISRGL 469

Query: 465 LEEF 468
            E +
Sbjct: 470 AESW 473