HHsearch alignment for GI: 254781102 and conserved domain: PRK00892
>PRK00892 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional.
Probab=97.20 E-value=0.0026 Score=40.77 Aligned_cols=93 Identities=17% Similarity=0.125 Sum_probs=67.6
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 97678786678988732033556555743002453023146898899803887676888999998598899984732233
Q gi|254781102|r 1 MKLQDLIYKDFPELINQLSIFPMQWRERKINEVSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSLQ 80 (497)
Q Consensus 1 mkl~~ll~~~~~~~~~~~~~~~~~~~d~~i~~i~~DSr~v~~g~lFval~G~~~dGh~fi~~A~~~GA~~~i~~~~~~~~ 80 (497)
T Consensus 3 ~tL~eIA-----~~lgg~l~---Gd~d~~I~gva-~l~~A~~~~IsF~------~~~ky~~~L~~tkAsavIv~~~~~~- 66 (343)
T PRK00892 3 LTLAELA-----EQLGAELH---GDGDIEITGLA-PLDEAGPGQLSFL------DNPKYRKQLKDTQAGAVIVSPDDAE- 66 (343)
T ss_pred CCHHHHH-----HHHCCEEE---CCCCCEEECCC-CHHHCCCCCEEEE------ECHHHHHHHHCCCCEEEEECHHHHH-
T ss_conf 3199999-----97599997---79982796454-9666899809999------5888888875578749995478885-
Q ss_pred CCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCC
Q ss_conf 343223479709997998999999999982762
Q gi|254781102|r 81 DFSATIRSNTPILVVDNTRKFLSLFASRLYGKH 113 (497)
Q Consensus 81 ~~~~~~~~~~p~i~V~d~~~aL~~la~~~~~~~ 113 (497)
T Consensus 67 ----~~~~~~~~Iiv~nP~~afaki~~lF~~~~ 95 (343)
T PRK00892 67 ----KVPAHRAALVVKNPYLAFARVAQLFDTPP 95 (343)
T ss_pred ----HCCCCCCEEEECCHHHHHHHHHHHHCCCC
T ss_conf ----57588738998998999999999746764