HHsearch alignment for GI: 254781102 and conserved domain: TIGR03453
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=91.34 E-value=0.078 Score=31.12 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=29.6
Q ss_pred CCEEEEE---EEECCCEEHHHHHHHHHHCCCCCCCC
Q ss_conf 0224565---43065200012333332102322222
Q gi|254781102|r 115 ENILAVT---GTSGKSSVASFVQQICQRSGLSSFQI 147 (497)
Q Consensus 115 ~~vIgIT---GTnGKTTt~~~l~~iL~~~g~~~~~~ 147 (497)
T Consensus 104 ~~VIav~N~KGGVGKTTtav~LA~~LA~~G~RVLvI 139 (387)
T TIGR03453 104 LQVIAVTNFKGGSGKTTTSAHLAQYLALRGYRVLAI 139 (387)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 808999788876569999999999999779988999