HHsearch alignment for GI: 254781102 and conserved domain: TIGR03499

Probab=90.80  E-value=1.2  Score=23.38  Aligned_cols=78  Identities=27%  Similarity=0.519  Sum_probs=49.3

Q ss_pred             CCCCCEEEECCCCCCCCHHHHHHHHHHHHC------CEEEECCCCCCCCCHHHH--HHHHHHCCCCEEEECCHHHHHHHH
Q ss_conf             344403540266546004689999998619------899990887989898999--999983479809978989999999
Q gi|254781102|r  381 SGRIIVVFGCGGDRDQGKRPIMGKIALDLA------DIAIVTDDNPRSEDPEKI--RAEIIHGIPGFIEKGNRIEAIRTA  452 (497)
Q Consensus       381 ~~r~i~V~G~~Gdrd~~kr~~mg~~a~~~a------d~vi~t~d~~r~e~~~~I--~~~i~~g~~~~~~~~dr~eAi~~A  452 (497)
T Consensus       193 ~~~vi~lvGPTG---VGKTTTiAKLAa~~~l~~~~~~V~lIT~DtyRigA~eQLk~ya~il-~vp-~~vv~~~-~~l~~~  266 (282)
T TIGR03499       193 QGGVIALVGPTG---VGKTTTLAKLAARFVLEHGKKKVALITTDTYRIGAVEQLKTYAKIL-GVP-VKVARDP-KELAKA  266 (282)
T ss_pred             CCCEEEEECCCC---CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH-CCE-EEEECCH-HHHHHH
T ss_conf             672799977888---7578899999999999738996799980777678999999999995-974-8993999-999999


Q ss_pred             HHHCCCCCEEEE
Q ss_conf             996589889999
Q gi|254781102|r  453 IEMLNKQDVLVV  464 (497)
Q Consensus       453 ~~~a~~gDvili  464 (497)
T Consensus       267 l~~~~~~d~IlI  278 (282)
T TIGR03499       267 LERLRDKDLILI  278 (282)
T ss_pred             HHHCCCCCEEEE
T ss_conf             986579899998