HHsearch alignment for GI: 254781102 and conserved domain: pfam03308
>pfam03308 ArgK ArgK protein. The ArgK protein acts as an ATPase enzyme and as a kinase, and phosphorylates periplasmic binding proteins involved in the LAO (lysine, arginine, ornithine)/AO transport systems.
Probab=94.10 E-value=0.057 Score=32.00 Aligned_cols=134 Identities=19% Similarity=0.225 Sum_probs=65.8
Q ss_pred HHHHHHCCC-CCCEEEEEEE--ECCCEEHHHHHHHHHHCCCCCCCCCCCC----CCCCCCCC----CCCC---------C
Q ss_conf 999982762-0022456543--0652000123333321023222223454----43323554----4576---------7
Q gi|254781102|r 105 FASRLYGKH-PENILAVTGT--SGKSSVASFVQQICQRSGLSSFQIGPTS----TISSFAQD----NRLT---------T 164 (497)
Q Consensus 105 la~~~~~~~-~~~vIgITGT--nGKTTt~~~l~~iL~~~g~~~~~~g~~~----~~~~~~~~----~~~T---------t 164 (497)
T Consensus 18 ll~~~~~~~g~a~~iGiTG~PGaGKStli~~l~~~~~~~g~~vaVlAvDPSS~~sgGaiLGDr~RM~~~~~~~~vfiRs~ 97 (267)
T pfam03308 18 LLRRLMPLTGRAHRVGITGVPGAGKSTLIEALGMELRRRGHRVAVLAVDPSSPFTGGSILGDRTRMQRLAVDPGAFIRSS 97 (267)
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEC
T ss_conf 99998743599559987689988799999999999996898689999789998888630010777765058998588645
Q ss_pred C-------CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 5-------31221111111011223333356676665554310432-121112321545543211011223455421000
Q gi|254781102|r 165 P-------SPIYLAKALSYLSSQGVTHVSVEASSHGLDQHRLDGIK-LIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEE 236 (497)
Q Consensus 165 P-------~~~~l~~~l~~~~~~g~~~~vlEvSS~gl~~~rl~~i~-~diaviTNI~~dHLd~~gs~e~y~~aK~~If~~ 236 (497)
T Consensus 98 ~srg~lGGls~~t~~~i~lleaaGfD~IivETV--GVGQsE~~v~~~aD~~llv~~-P------g~GDeiQ~iKaGImE- 167 (267)
T pfam03308 98 PSRGALGGLSRATREAILLLDAAGFDVIIIETV--GVGQSEVDIANMADTFVLVTI-P------GGGDDLQGIKAGLME- 167 (267)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECC--CCCCCCHHHHHHCCEEEEEEC-C------CCCHHHHHHHHHHHH-
T ss_conf 778888871476999999999779999999247--777530355541576899955-8------876088898753765-
Q ss_pred CCCCCCCCCCCCCCC
Q ss_conf 000122321112542
Q gi|254781102|r 237 LLPKESPAIIYADDA 251 (497)
Q Consensus 237 ~~~~~~~~ViN~Dd~ 251 (497)
T Consensus 168 i---aDi~vVNKaD~ 179 (267)
T pfam03308 168 I---ADIYVVNKADL 179 (267)
T ss_pred H---CCEEEEECCCH
T ss_conf 3---54899966764