HHsearch results for GI: 254781102 and protein with PDBid: 2f00_A
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=100.00 E-value=0 Score=413.19 Aligned_cols=340 Identities=19% Similarity=0.292 Sum_probs=248.7
Q ss_pred CCEEEEEEEECCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf 02245654306520001233333210232222234544332355445767531221111111011223333356676665
Q gi|254781102|r 115 ENILAVTGTSGKSSVASFVQQICQRSGLSSFQIGPTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSVEASSHGL 194 (497)
Q Consensus 115 ~~vIgITGTnGKTTt~~~l~~iL~~~g~~~~~~g~~~~~~~~~~~~~~TtP~~~~l~~~l~~~~~~g~~~~vlEvSS~gl 194 (497)
.++||||||||||||+.|++++|+.+|..+..++. .+...... .......+++|+|+||+.+
T Consensus 119 ~~~iaVTGTnGKTTtt~ml~~iL~~~g~~~~~~~g--~~~~~~~~----------------~~~~~~~~~~V~E~s~~~~ 180 (491)
T 2f00_A 119 RHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNG--GLVKAAGV----------------HARLGHGRYLIAEADESDA 180 (491)
T ss_dssp SEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEEEE--EEETTTTE----------------EEECCSSSEEEEECCCTTS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEC--CCCCCHHH----------------HHCCCCCCEEEEEECCCCC
T ss_conf 72799945678232999999999975999379971--64450244----------------2025899889999766401
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 5543104321211123215455432-110112234554210000001223211125420001222102356532222233
Q gi|254781102|r 195 DQHRLDGIKLIAGSFTNLGRDHIDY-HQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNAGCRVLSVGYQ 273 (497)
Q Consensus 195 ~~~rl~~i~~diaviTNI~~dHLd~-~gs~e~y~~aK~~If~~~~~~~~~~ViN~Dd~~~~~l~~~~~~~~~~~~~~g~~ 273 (497)
. ...++|+++|||||++||||+ |+|+|+|+++|.+||++ .++++.+|+|.||+..+.+.+. ...++++||..
T Consensus 181 ~---~~~~~p~iavitNi~~DHld~~~~~~e~y~~~k~~i~~~-~~~~~~~i~n~dd~~~~~~~~~---~~~~v~tfg~~ 253 (491)
T 2f00_A 181 S---FLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHN-LPFYGRAVMCVDDPVIRELLPR---VGRQTTTYGFS 253 (491)
T ss_dssp G---GGGCCCSEEEECCCCSCSGGGTTTCHHHHHHHHHHHHTT-SCTTCEEEEETTSHHHHHHGGG---CCSEEEEEESS
T ss_pred C---HHCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHC-CCCCCEEEEECCCHHHHHHHHH---CCCCEEEEECC
T ss_conf 3---011489899997786677512068899999999999966-9958889997988899999875---48863786001
Q ss_pred C-CCCCCCEECCCCCCCCCCC-CCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 3-3220000001454443211-2221001012234332221105778887752026767631112344334552100013
Q gi|254781102|r 274 G-KFIHLKKVCAIHNKQQVTI-SVEGKDFDFLFPLPGEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHVVPGRFEFVGT 351 (497)
Q Consensus 274 ~-~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~l~l~G~hni~NalaAia~a~~lGi~~~~i~~~L~~f~~~~gR~E~i~~ 351 (497)
. .++....+.....+..+.. ........+.++++|.||++|+++|++++..+|++.+.+.++|.+|++++||+|.+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~G~HN~~NalAAia~a~~lGi~~e~I~~aL~~F~g~~~R~E~vg~ 333 (491)
T 2f00_A 254 EDADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGE 333 (491)
T ss_dssp TTCSEEEEEEEEETTEEEEEEECTTSCCEEEEESSCSHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCCBTTSSEEEEE
T ss_pred CCCCEECCCHHHCCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 11110012211125665201101234331221035672015349999999998599578877665404788741489987
Q ss_pred C-------CCCCE-EEECCCCCHHHHHHHHHHHHHCC-CCCCCEEEECCCCCCCCHH---HHHHHHHHHHCCEEEECCCC
Q ss_conf 5-------57860-23000378689999741211002-3444035402665460046---89999998619899990887
Q gi|254781102|r 352 N-------SRGGR-IYVDYAHTSNSLEMILKNIRTIT-SGRIIVVFGCGGDRDQGKR---PIMGKIALDLADIAIVTDDN 419 (497)
Q Consensus 352 ~-------~~~~~-viiDyahNP~s~~~aL~~l~~~~-~~r~i~V~G~~Gdrd~~kr---~~mg~~a~~~ad~vi~t~d~ 419 (497)
. .++.. +++||||||+|++++|++++... .+|+++++| ++++...+ ..+++. ...+|.++++.+.
T Consensus 334 ~~~~~~~~~~~~~~i~DdyahnP~si~a~l~al~~~~~~~~ii~i~~--~~~~~~~~~~~~e~~~~-l~~aD~vil~~i~ 410 (491)
T 2f00_A 334 FPLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQ--PHRFTRTRDLYDDFANV-LTQVDTLLMLEVY 410 (491)
T ss_dssp EESSSSSSCSSEEEEEEECCCSHHHHHHHHHHHHTTCCSSEEEEEEC--CBCHHHHTTTHHHHHHH-HTTSSEEEECCCB
T ss_pred EEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEC--CCCCCCHHHHHHHHHHH-HHHCCEEEECCCC
T ss_conf 42123423789789998467895899999999996589976999976--77872479999999999-9869999996666
Q ss_pred CCCCCH------HHHHHHHHH-CCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCC-----CCCEEECCCEECC
Q ss_conf 989898------999999983-47980997898999999999658988999944688-----6635844978867
Q gi|254781102|r 420 PRSEDP------EKIRAEIIH-GIPGFIEKGNRIEAIRTAIEMLNKQDVLVVAGKGH-----ETVHIVTNGEKKM 482 (497)
Q Consensus 420 ~r~e~~------~~I~~~i~~-g~~~~~~~~dr~eAi~~A~~~a~~gDvili~GkG~-----e~~~~~~~~~~~~ 482 (497)
|++|.| +.|++.+.. +-.++..++|+++|++.+.+.++|||+||+.|.|+ +.+.++....+.+
T Consensus 411 ~a~e~~~~g~~~~~l~~~i~~~~~~~~~~~~~~~ea~~~l~~~~~~gDvVL~~Gsg~i~~~~~~l~e~~~k~~~~ 485 (491)
T 2f00_A 411 PAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPARVAEMLAPVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTP 485 (491)
T ss_dssp CSSSCCCTTSSHHHHTTC-------CCEECCCSSCCHHHHGGGCCSEEEEEEECSTTHHHHHHHHHHTTTCCC--
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCC
T ss_conf 886664458599999999985599897997999999999997589989999988998889999999987074576