HHsearch results for GI: 254781102 and protein with PDBid: 2j37_W

>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A

Probab=92.41  E-value=0.059  Score=30.51  Aligned_cols=30  Identities=27%  Similarity=0.420  Sum_probs=25.0

Q ss_pred             EEEEEEECCCEEHHHHHHHHHHCCCCCCCCC
Q ss_conf             4565430652000123333321023222223
Q gi|254781102|r  118 LAVTGTSGKSSVASFVQQICQRSGLSSFQIG  148 (497)
Q Consensus       118 IgITGTnGKTTt~~~l~~iL~~~g~~~~~~g  148 (497)
                      +|.||+ |||||..=++..+...|+++..+.
T Consensus       107 vG~~Gv-GKTTT~aKLA~~~~~~g~kv~Lva  136 (504)
T 2j37_W          107 VGLQGS-GKTTTCSKLAYYYQRKGWKTCLIC  136 (504)
T ss_dssp             ECSTTS-SHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ECCCCC-CCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf             668788-865508999999986002020000