HHsearch results for GI: 254781102 and protein with PDBid: 3hn7_A
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; YP_263340.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=0 Score=458.15 Aligned_cols=353 Identities=15% Similarity=0.150 Sum_probs=262.1
Q ss_pred CCCEEEEEEEECCCEEHHHHHHHHHHCCCCCCC-CCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC-
Q ss_conf 002245654306520001233333210232222-234544332355-44576753122111111101122333335667-
Q gi|254781102|r 114 PENILAVTGTSGKSSVASFVQQICQRSGLSSFQ-IGPTSTISSFAQ-DNRLTTPSPIYLAKALSYLSSQGVTHVSVEAS- 190 (497)
Q Consensus 114 ~~~vIgITGTnGKTTt~~~l~~iL~~~g~~~~~-~g~~~~~~~~~~-~~~~TtP~~~~l~~~l~~~~~~g~~~~vlEvS- 190 (497)
..++||||||||||||+.|++++|+.+|++++. +|.......... ....++|.+.........+...+.+|+|+|+|
T Consensus 121 ~~~vI~VTGTnGKTTTt~mi~~iL~~~g~~~~~~iGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~E~~e 200 (524)
T 3hn7_A 121 SRHVIAVAGTHGKTTTTTMLAWILHYAGIDAGFLIGGVPLVNTTDTNLQQVFAHSSYLGTEKDDSDNSVNTGYFVIEADE 200 (524)
T ss_dssp GSEEEEEECSSCHHHHHHHHHHHHHHTTCCCEEECSCCBCCCSSCHHHHHHTTSSEECCCCCCSSCTTCCCCEEEEECCS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf 58289997888825389999999997299862997570345776643356778733430134455402468879999844
Q ss_pred ---HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC-----
Q ss_conf ---666555431043212111232154554321101122345542100000012232111254200012221023-----
Q gi|254781102|r 191 ---SHGLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHN----- 262 (497)
Q Consensus 191 ---S~gl~~~rl~~i~~diaviTNI~~dHLd~~gs~e~y~~aK~~If~~~~~~~~~~ViN~Dd~~~~~l~~~~~~----- 262 (497)
||++.+.|...++|+++|||||++||||||+|+|+|+++|.++|+. .++++.+|+|.||+.......+...
T Consensus 201 ~~~s~~~~~~~~~~~~p~iaviTNI~~DHLd~~~s~e~~~~ak~~i~~~-~~~~g~~V~n~dd~~~~~~~~~~~~~~~~~ 279 (524)
T 3hn7_A 201 YDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFADLDAIQTQFHHMVRM-IPSTGKIIMPAATISLEDTLAKGVWTPIWR 279 (524)
T ss_dssp CCCBTTBCCCHHHHCCCSEEEECCCCCC------CHHHHHHHHHHHHTT-SCTTSEEEEESSCHHHHHHHHTCCCSCEEE
T ss_pred CCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 4301455200014446768999747786732333035556677778742-887885475340456999999876431034
Q ss_pred -------------CCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCC---EEECCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf -------------56532222233-3322000000145444321122210---010122343322211057788877520
Q gi|254781102|r 263 -------------AGCRVLSVGYQ-GKFIHLKKVCAIHNKQQVTISVEGK---DFDFLFPLPGEFQVYNALVAAGLCIAI 325 (497)
Q Consensus 263 -------------~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~l~l~G~hni~NalaAia~a~~l 325 (497)
...++.+++.. ..++....+... +..|++...+. ...++++++|.||++|+++|++++..+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~~~--~~~~~~~~~~~~~~~~~~~l~l~G~hNv~NalaAia~a~~l 357 (524)
T 3hn7_A 280 TSVIDSTISSVRREDSPLENSQAENSSDWQAELISAD--GSQFTVSFNDNKEATALVNWSMSGLHNVNNALVAIAAAYNI 357 (524)
T ss_dssp EEEEC-------------------CCCSEEEEEEETT--TTEEEEEETTEEEEEEEEECSCCSHHHHHHHHHHHHHHHHT
T ss_pred CCEEECCCCCCCCCCCCEEEECCCCCCEEEEEEEEEC--CCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 3111101111113465302203554654999999854--87135643115640478983577719999999999999971
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCC-CCCCCEEEECCCC-CCCCHHHHHH
Q ss_conf 2676763111234433455210001355786023000378689999741211002-3444035402665-4600468999
Q gi|254781102|r 326 GIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSNSLEMILKNIRTIT-SGRIIVVFGCGGD-RDQGKRPIMG 403 (497)
Q Consensus 326 Gi~~~~i~~~L~~f~~~~gR~E~i~~~~~~~~viiDyahNP~s~~~aL~~l~~~~-~~r~i~V~G~~Gd-rd~~kr~~mg 403 (497)
|++++.|.++|++|++++||||++.. .++..+++||||||++++++|++++++. .+|+|+||+.++. |..+....+.
T Consensus 358 Gi~~~~i~~~L~~f~g~~~R~e~i~~-~~~~~viDDYahnP~si~a~l~al~~~~~~~rii~v~~~~~~s~~~~~~~~~~ 436 (524)
T 3hn7_A 358 GVSVKTACAALSAFAGIKRRMELIGD-VNDILVFDDFAHHPTAITTTLDGAKKKLADRRLWAIIEPRSNTMKMGIHQDSL 436 (524)
T ss_dssp TCCHHHHHHHHHTCCCBTTSSEEEEE-ETTEEEEEECCCSHHHHHHHHHHHHHHHTTSCEEEEEECCCCSSCCSCCTTHH
T ss_pred CCCHHEEEECCCCCCCCHHHHEEEEE-CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf 99604022200046773324035640-47815997347998999999999997669985999988899842134668999
Q ss_pred HHHHHHCCEEEECCCCCCCCCHHHHHHHHHH---CCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 9998619899990887989898999999983---479809978989999999996589889999446886
Q gi|254781102|r 404 KIALDLADIAIVTDDNPRSEDPEKIRAEIIH---GIPGFIEKGNRIEAIRTAIEMLNKQDVLVVAGKGHE 470 (497)
Q Consensus 404 ~~a~~~ad~vi~t~d~~r~e~~~~I~~~i~~---g~~~~~~~~dr~eAi~~A~~~a~~gDvili~GkG~e 470 (497)
..+...+|.+++|.++++.|.|..+.+.... ...+...+.|++||++.+.++|+|||+||++|||.-
T Consensus 437 ~~~~~~aD~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eai~~~~~~a~~gDiVLi~G~G~~ 506 (524)
T 3hn7_A 437 AQSATLADHTLWYEPTGLEWGLKEVIDNATIANPSIGSQQVLSSVDDIIKHICTHAKAGDAIVIMSNGGF 506 (524)
T ss_dssp HHHTTTSSEEEEECCTTCCCSHHHHHHHHHHHCGGGCCEEEESCHHHHHHHHHHHCCTTCEEEEEESSCG
T ss_pred HHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCH
T ss_conf 9999749999997888766487878879987434578849989999999999985799899999879976