HHsearch results for GI: 254781102 and protein with PDBid: 3hn7_A

>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; YP_263340.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=100.00  E-value=0  Score=458.15  Aligned_cols=353  Identities=15%  Similarity=0.150  Sum_probs=262.1

Q ss_pred             CCCEEEEEEEECCCEEHHHHHHHHHHCCCCCCC-CCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC-
Q ss_conf             002245654306520001233333210232222-234544332355-44576753122111111101122333335667-
Q gi|254781102|r  114 PENILAVTGTSGKSSVASFVQQICQRSGLSSFQ-IGPTSTISSFAQ-DNRLTTPSPIYLAKALSYLSSQGVTHVSVEAS-  190 (497)
Q Consensus       114 ~~~vIgITGTnGKTTt~~~l~~iL~~~g~~~~~-~g~~~~~~~~~~-~~~~TtP~~~~l~~~l~~~~~~g~~~~vlEvS-  190 (497)
                      ..++||||||||||||+.|++++|+.+|++++. +|.......... ....++|.+.........+...+.+|+|+|+| 
T Consensus       121 ~~~vI~VTGTnGKTTTt~mi~~iL~~~g~~~~~~iGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~E~~e  200 (524)
T 3hn7_A          121 SRHVIAVAGTHGKTTTTTMLAWILHYAGIDAGFLIGGVPLVNTTDTNLQQVFAHSSYLGTEKDDSDNSVNTGYFVIEADE  200 (524)
T ss_dssp             GSEEEEEECSSCHHHHHHHHHHHHHHTTCCCEEECSCCBCCCSSCHHHHHHTTSSEECCCCCCSSCTTCCCCEEEEECCS
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf             58289997888825389999999997299862997570345776643356778733430134455402468879999844


Q ss_pred             ---HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC-----
Q ss_conf             ---666555431043212111232154554321101122345542100000012232111254200012221023-----
Q gi|254781102|r  191 ---SHGLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHN-----  262 (497)
Q Consensus       191 ---S~gl~~~rl~~i~~diaviTNI~~dHLd~~gs~e~y~~aK~~If~~~~~~~~~~ViN~Dd~~~~~l~~~~~~-----  262 (497)
                         ||++.+.|...++|+++|||||++||||||+|+|+|+++|.++|+. .++++.+|+|.||+.......+...     
T Consensus       201 ~~~s~~~~~~~~~~~~p~iaviTNI~~DHLd~~~s~e~~~~ak~~i~~~-~~~~g~~V~n~dd~~~~~~~~~~~~~~~~~  279 (524)
T 3hn7_A          201 YDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFADLDAIQTQFHHMVRM-IPSTGKIIMPAATISLEDTLAKGVWTPIWR  279 (524)
T ss_dssp             CCCBTTBCCCHHHHCCCSEEEECCCCCC------CHHHHHHHHHHHHTT-SCTTSEEEEESSCHHHHHHHHTCCCSCEEE
T ss_pred             CCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf             4301455200014446768999747786732333035556677778742-887885475340456999999876431034


Q ss_pred             -------------CCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCC---EEECCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf             -------------56532222233-3322000000145444321122210---010122343322211057788877520
Q gi|254781102|r  263 -------------AGCRVLSVGYQ-GKFIHLKKVCAIHNKQQVTISVEGK---DFDFLFPLPGEFQVYNALVAAGLCIAI  325 (497)
Q Consensus       263 -------------~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~l~l~G~hni~NalaAia~a~~l  325 (497)
                                   ...++.+++.. ..++....+...  +..|++...+.   ...++++++|.||++|+++|++++..+
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~~~--~~~~~~~~~~~~~~~~~~~l~l~G~hNv~NalaAia~a~~l  357 (524)
T 3hn7_A          280 TSVIDSTISSVRREDSPLENSQAENSSDWQAELISAD--GSQFTVSFNDNKEATALVNWSMSGLHNVNNALVAIAAAYNI  357 (524)
T ss_dssp             EEEEC-------------------CCCSEEEEEEETT--TTEEEEEETTEEEEEEEEECSCCSHHHHHHHHHHHHHHHHT
T ss_pred             CCEEECCCCCCCCCCCCEEEECCCCCCEEEEEEEEEC--CCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf             3111101111113465302203554654999999854--87135643115640478983577719999999999999971


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCC-CCCCCEEEECCCC-CCCCHHHHHH
Q ss_conf             2676763111234433455210001355786023000378689999741211002-3444035402665-4600468999
Q gi|254781102|r  326 GIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSNSLEMILKNIRTIT-SGRIIVVFGCGGD-RDQGKRPIMG  403 (497)
Q Consensus       326 Gi~~~~i~~~L~~f~~~~gR~E~i~~~~~~~~viiDyahNP~s~~~aL~~l~~~~-~~r~i~V~G~~Gd-rd~~kr~~mg  403 (497)
                      |++++.|.++|++|++++||||++.. .++..+++||||||++++++|++++++. .+|+|+||+.++. |..+....+.
T Consensus       358 Gi~~~~i~~~L~~f~g~~~R~e~i~~-~~~~~viDDYahnP~si~a~l~al~~~~~~~rii~v~~~~~~s~~~~~~~~~~  436 (524)
T 3hn7_A          358 GVSVKTACAALSAFAGIKRRMELIGD-VNDILVFDDFAHHPTAITTTLDGAKKKLADRRLWAIIEPRSNTMKMGIHQDSL  436 (524)
T ss_dssp             TCCHHHHHHHHHTCCCBTTSSEEEEE-ETTEEEEEECCCSHHHHHHHHHHHHHHHTTSCEEEEEECCCCSSCCSCCTTHH
T ss_pred             CCCHHEEEECCCCCCCCHHHHEEEEE-CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf             99604022200046773324035640-47815997347998999999999997669985999988899842134668999


Q ss_pred             HHHHHHCCEEEECCCCCCCCCHHHHHHHHHH---CCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf             9998619899990887989898999999983---479809978989999999996589889999446886
Q gi|254781102|r  404 KIALDLADIAIVTDDNPRSEDPEKIRAEIIH---GIPGFIEKGNRIEAIRTAIEMLNKQDVLVVAGKGHE  470 (497)
Q Consensus       404 ~~a~~~ad~vi~t~d~~r~e~~~~I~~~i~~---g~~~~~~~~dr~eAi~~A~~~a~~gDvili~GkG~e  470 (497)
                      ..+...+|.+++|.++++.|.|..+.+....   ...+...+.|++||++.+.++|+|||+||++|||.-
T Consensus       437 ~~~~~~aD~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eai~~~~~~a~~gDiVLi~G~G~~  506 (524)
T 3hn7_A          437 AQSATLADHTLWYEPTGLEWGLKEVIDNATIANPSIGSQQVLSSVDDIIKHICTHAKAGDAIVIMSNGGF  506 (524)
T ss_dssp             HHHTTTSSEEEEECCTTCCCSHHHHHHHHHHHCGGGCCEEEESCHHHHHHHHHHHCCTTCEEEEEESSCG
T ss_pred             HHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCH
T ss_conf             9999749999997888766487878879987434578849989999999999985799899999879976