HHsearch results for GI: 254781102 and protein with PDBid: 3mvn_A
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=99.84 E-value=9.8e-21 Score=152.46 Aligned_cols=140 Identities=15% Similarity=0.144 Sum_probs=102.8
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHH
Q ss_conf 20267676311123443345521000135578602300037868999974121100234440354026654600468999
Q gi|254781102|r 324 AIGIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSNSLEMILKNIRTITSGRIIVVFGCGGDRDQGKRPIMG 403 (497)
Q Consensus 324 ~lGi~~~~i~~~L~~f~~~~gR~E~i~~~~~~~~viiDyahNP~s~~~aL~~l~~~~~~r~i~V~G~~Gdrd~~kr~~mg 403 (497)
..|+ +.+.++|..|+++++|||++.. .+|.+||+||||||++++++++++++..+.++++++..++.....++..+.
T Consensus 8 ~~gi--d~~~~~l~~~~g~~RR~E~v~~-~~g~~vidDyAHnP~~i~a~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 84 (163)
T 3mvn_A 8 SSGV--DLGTENLYFQSNAQRRLEVKGV-VNNITVYDDFAHHPTAITATIDALRAKVGQQRILAVLEPRSNTMKMGVHKH 84 (163)
T ss_dssp ---------------------CCEEEEE-ETTEEEEEECCCSHHHHHHHHHHHHHHHTTSCEEEEECCC---------CH
T ss_pred CCCH--HHHHHHHHHCCCCCCCEEEEEE-CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 2254--8999888757897635499972-599489996899989999999999862366538842022331144676699
Q ss_pred HHHHH--HCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 99986--1989999088798989899999998347980997898999999999658988999944688
Q gi|254781102|r 404 KIALD--LADIAIVTDDNPRSEDPEKIRAEIIHGIPGFIEKGNRIEAIRTAIEMLNKQDVLVVAGKGH 469 (497)
Q Consensus 404 ~~a~~--~ad~vi~t~d~~r~e~~~~I~~~i~~g~~~~~~~~dr~eAi~~A~~~a~~gDvili~GkG~ 469 (497)
+.+.. .++.++++.+.+..+.+..+.+ ....+...++|+.+|++.+.++++|||+||++|+|.
T Consensus 85 e~~~~l~~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~eai~~l~~~a~~gDvVL~~G~G~ 149 (163)
T 3mvn_A 85 ELATSLQDADSVFIYQPPTIEWQVSEVLA---NLAQPAISADDVDELVMRIVQQAKPNDHILIMSNGA 149 (163)
T ss_dssp HHHHHHTTCSEEEEECC----CCHHHHHT---TCCSCEEEESSHHHHHHHHHHHCCTTCEEEEECSSC
T ss_pred HHHHHHHCCCEEEECCCCCCHHHHHHHHH---HCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 99998513779998278541143688987---504682996589999999998679969999984997