PSIBLAST alignment of GI: 254781102 and protein with PDB id: 1e0d
>gi|9257128|pdb|1E0D|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase Length = 437
>gi|13096498|pdb|1EEH|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase Length = 437
Score = 49.1 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 72/398 (18%), Positives = 137/398 (34%), Gaps = 54/398 (13%)
Query: 68 AEAIVVSSAYSLQDFSATIRSNTPILVVDNTRKFLSLFASRLYGKHPENILAVTGTSGKS 127
A+ IV S +L S + ++ I +V + + I+A+TG++GKS
Sbjct: 65 ADLIVASPGIALAHPSLSAAADAGIEIVGDIE--------LFCREAQAPIVAITGSNGKS 116
Query: 128 SVASFVQQICQRSGLSSFQIGPTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSV 187
+V + V ++ + +G++ G + D+ +
Sbjct: 117 TVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDE--------------------CELYVL 156
Query: 188 EASSHGLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIY 247
E SS L+ ++ +A + N+ DH+D + + A + ++
Sbjct: 157 ELSSFQLET--TSSLQAVAATILNVTEDHMDRYPFGLQQYRAAK---LRIYENAKVCVVN 211
Query: 248 ADDAYSKEVMKRAHNAGCRVLSVGYQGKFIHLKKVCAIHNKQQVTISVEGKDFDFLFPLP 307
ADDA + + +++G + + E L
Sbjct: 212 ADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWL-------RVKGEKVLNVKEMKLS 264
Query: 308 GEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSN 367
G+ NAL A L A G+ A L+ L +P RFE V ++ I A
Sbjct: 265 GQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVG 324
Query: 368 SLEMILKNIRTITSGRIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTDDNPRSEDPEK 427
S E L + G + ++ G G K +A + DN R +
Sbjct: 325 STEAALNGL--HVDGTLHLLLGGDG-----KSADFSPLAR------YLNGDNVRLYCFGR 371
Query: 428 IRAEIIHGIPGFIEK-GNRIEAIRTAIEMLNKQDVLVV 464
A++ P E+ +A+R + D++++
Sbjct: 372 DGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLL 409