RPSBLAST alignment for GI: 254781102 and conserved domain: PRK00139
>gnl|CDD|178894 PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Provisional. Length = 460
Score = 498 bits (1286), Expect = e-141
Identities = 196/504 (38%), Positives = 267/504 (52%), Gaps = 59/504 (11%)
Query: 1 MKLQDLIYKDFPELINQLSIFPMQWRERKINEVSSDSRHIQAGWIFVAIVGNKEDGHLFI 60
MKL+DL+ +I ++ DSR ++ G +FVA+ G+K DG FI
Sbjct: 4 MKLRDLL------------------APVEITGLTYDSRKVKPGDLFVALPGHKVDGRDFI 45
Query: 61 PQAIAQGAEAIVVSSAYSLQDFSATIRSNTPILVVDNTRKFLSLFASRLYGKHPEN---I 117
QAIA GA A+V + P+++V + RK L+L A+ YG HP + +
Sbjct: 46 AQAIANGAAAVVAEADGEAGT-------GVPVIIVPDLRKALALLAAAFYG-HPSDKLKL 97
Query: 118 LAVTGTSGKSSVASFVQQICQRSGLSSFQIGPTSTISSFAQDNR----LTTPSPIYLAKA 173
+ VTGT+GK++ A + QI + G + IG T+ + LTTP + L +
Sbjct: 98 IGVTGTNGKTTTAYLLAQILRLLGEKTALIG---TLGNGIGGELIPSGLTTPDALDLQRL 154
Query: 174 LSYLSSQGVTHVSVEASSHGLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRL 233
L+ L GVT+ ++E SSH LDQ R+DG+K FTNL RDH+DYH T + Y AK RL
Sbjct: 155 LAELVDAGVTYAAMEVSSHALDQGRVDGLKFDVAVFTNLSRDHLDYHGTMEDYLAAKARL 214
Query: 234 FEELLPKESPAIIYADDAYSKEVMKRAHNAGCRVLSVGYQGKFIHLKKVCAIHNKQQVTI 293
F EL A+I ADD + ++ A +V G + V + Q T+
Sbjct: 215 FSELGLA---AVINADDEVGRRLL-----ALPDAYAVSMAGADLRATDVEYTDSGQTFTL 266
Query: 294 SVEGKDFDFLFPLPGEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHVVPGRFEFVGTNS 353
+ PL G F V N L A +A+G+ L L KL VPGR E V
Sbjct: 267 -----VTEVESPLIGRFNVSNLLAALAALLALGVPLEDALAALAKLQGVPGRMERVDAGQ 321
Query: 354 RGGRIYVDYAHTSNSLEMILKNIRTITSGRIIVVFGCGGDRDQGKRPIMGKIALDLADIA 413
G + VDYAHT ++LE +L+ +R GR+I VFGCGGDRD+GKRP+MG IA LAD+
Sbjct: 322 -GPLVIVDYAHTPDALEKVLEALRPHAKGRLICVFGCGGDRDKGKRPLMGAIAERLADVV 380
Query: 414 IVTDDNPRSEDPEKIRAEIIHGIPGFIEKGNRIEAIRTAIEMLNKQDVLVVAGKGHETVH 473
IVT DNPRSEDP I A+I+ GI IE +R EAIR AI DV+++AGKGHE
Sbjct: 381 IVTSDNPRSEDPAAIIADILAGIYDVIE--DRAEAIRYAIAQAKPGDVVLIAGKGHEDYQ 438
Query: 474 IVTNGEKKMSV---DCDIIREILG 494
I+ G K + D ++ RE L
Sbjct: 439 II-GGVK---IPFDDREVAREALA 458