RPSBLAST alignment for GI: 254781102 and conserved domain: PRK02006

>gnl|CDD|179359 PRK02006, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 498

 Score = 58.5 bits (142), Expect = 3e-09
 Identities = 71/296 (23%), Positives = 107/296 (36%), Gaps = 84/296 (28%)

Query: 102 LSLFASRLY-----GKHPENILAVTGTSGKSSVASFVQQICQRSGLSSFQIGPTSTISSF 156
           + LFA  L      G  P+ +LA+TGT+GK++  +    +C+R+G     +     IS  
Sbjct: 104 IELFAQALAALGASGYAPK-VLAITGTNGKTTTTALTGLLCERAGKK---VAVAGNIS-- 157

Query: 157 AQDNRLTTPSPIYLAKALSYLSSQGVTHVSV-EASS------HGLDQHRLDGIKLIAGSF 209
                     P  L K +  + +  +  V V E SS      H L           A + 
Sbjct: 158 ----------PAALDKLMEAIDAGALPDVWVLELSSFQLETTHTLAPD--------AATV 199

Query: 210 TNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAH-NAGCRVL 268
            N+ +DH+D+H +  AY  AK R+F       +  ++  DDA    VM  A        +
Sbjct: 200 LNITQDHLDWHGSMAAYAAAKARIF----GPRTVRVLNRDDA---RVMAMAPPGGAADAV 252

Query: 269 SVG-----YQGKFIHLKKVCAIHNKQQVTISVEGKDFDFLFPLP---------------- 307
           + G       G +        +     +   VE +D D   P P                
Sbjct: 253 TFGLDEPAADGDY-------GLLRDNGMAWLVEAEDRDAADPAPSRRRKKDAAPPPDIRL 305

Query: 308 ------------GEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHVVPGRFEFVGT 351
                       G     NAL A  L  AIG+ +A +L  L +    P R E V T
Sbjct: 306 KRLMPADALRIRGLHNAANALAALALARAIGLPAAPLLHGLREYRGEPHRVELVAT 361