RPSBLAST alignment for GI: 254781102 and conserved domain: PRK03369

>gnl|CDD|179571 PRK03369, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 488
 Score = 59.4 bits (144), Expect = 2e-09
 Identities = 83/336 (24%), Positives = 124/336 (36%), Gaps = 61/336 (18%)

Query: 54  EDGHLFIPQAIAQGAEAIVVSSA------YSLQDFSATIRSNTPILVVDNTRKF------ 101
           +D    +     +G   +  S A      Y+L   S   R   P+L              
Sbjct: 42  DDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFRPTAPVLAAAAAAGVPIWGDV 101

Query: 102 -LS--LFASRLYGKHPENILAVTGTSGKSSVASFVQQICQRSGLSSFQIGPTSTISSFAQ 158
            L+  L A+  YG  P   L VTGT+GK++  S +  +   +G  S   G    I S   
Sbjct: 102 ELAWRLDAAGCYGP-PRRWLVVTGTNGKTTTTSMLHAMLIAAGRRSVLCG---NIGSPVL 157

Query: 159 DNRLTTPSPIYLAKALSYLSSQGVTHVSVEASSHGLDQHRLDGIKLIAGSFTNLGRDHID 218
           D  +       LA               VE SS  L  H    ++  AG+  N+  DH+D
Sbjct: 158 D--VLDEPAELLA---------------VELSSFQL--HWAPSLRPEAGAVLNIAEDHLD 198

Query: 219 YHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNAGCRV---LSVGYQGK 275
           +H T  AY  AK R     +     A++  DD+ +  ++  A  A  RV   L     G+
Sbjct: 199 WHGTMAAYAAAKARALTGRV-----AVVGLDDSRAAALLDTA-PAPVRVGFRLGEPAAGE 252

Query: 276 FIHLKKVCAIHNKQQVTISVEGKDFDFL----FPLPGEFQVYNALVAAGLCIAIGIDSAL 331
                    + +   V  +    D         P+PG   V +AL AA L  A+G+ +  
Sbjct: 253 L-------GVRDGHLVDRAF-ADDLRLAPVASIPVPGPVGVLDALAAAALARAVGVPAGA 304

Query: 332 VLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSN 367
           + + L    V   R E V      G  YVD +  +N
Sbjct: 305 IADALASFRVGRHRAEVVAV--ADGITYVDDSKATN 338