RPSBLAST alignment of GI: 254781102 and protein with PDBid: 3hn7
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; YP_263340.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4} Length = 524
Score = 160 bits (406), Expect = 6e-40
Identities = 61/445 (13%), Positives = 131/445 (29%), Gaps = 47/445 (10%)
Query: 59 FIPQAIAQGAEAIVVSSAYSLQDFSATIRSNTPILV--VDNTRKFLS---LFASRLYGKH 113
++ + + +VV +A ++ ++ +D ++ S + ++
Sbjct: 72 YLIAHLQPAPDLVVVGNA---------MKRGMDVIEYMLDTGLRYTSGPQFLSEQV--LQ 120
Query: 114 PENILAVTGTSGKSSVASFVQQICQRSGL--SSFQIGPTSTISSFAQDNRLTTPSPIYLA 171
+++AV GT GK + I +G+ G ++ ++ S
Sbjct: 121 SRHVIAVAGTHGKXXXXXMLAWILHYAGIDAGFLIGGVPLVNTTDTNLQQVFAHSSYLGT 180
Query: 172 KALSYLSSQGVTHVSVEA----SSHGLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQQAYF 227
+ +S + +EA S+ + + + NL DH D A
Sbjct: 181 EKDDSDNSVNTGYFVIEADEYDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFADLDAIQ 240
Query: 228 NAKMRLFEELLPKESPAI----IYADDAYSKEVMKRAHNAGCRVLSVGYQGKFIHLKKVC 283
+ + + I +D +K V ++ + +
Sbjct: 241 TQFHHMVRMIPSTGKIIMPAATISLEDTLAKGVWTPIWRTSVIDSTISSVRREDSPLENS 300
Query: 284 AIHNKQQVT---ISVEGKDFD------------FLFPLPGEFQVYNALVAAGLCIAIGID 328
N IS +G F + + G V NALVA IG+
Sbjct: 301 QAENSSDWQAELISADGSQFTVSFNDNKEATALVNWSMSGLHNVNNALVAIAAAYNIGVS 360
Query: 329 SALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSNSLEMILKNIRTI-TSGRIIVV 387
L + R E +G ++ D+AH ++ L + R+ +
Sbjct: 361 VKTACAALSAFAGIKRRMELIGDV-NDILVFDDFAHHPTAITTTLDGAKKKLADRRLWAI 419
Query: 388 FGCGGD-RDQGKRPIMGKIALDLADIAIVTDDNPRSEDPEKIRAEIIHGIPGFIEK---G 443
+ G + LAD + + +++ P +
Sbjct: 420 IEPRSNTMKMGIHQDSLAQSATLADHTLWYEPTGLEWGLKEVIDNATIANPSIGSQQVLS 479
Query: 444 NRIEAIRTAIEMLNKQDVLVVAGKG 468
+ + I+ D +V+ G
Sbjct: 480 SVDDIIKHICTHAKAGDAIVIMSNG 504