HHsearch alignment for GI: 254781103 and conserved domain: COG4953
>COG4953 PbpC Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=320.35 Aligned_cols=300 Identities=21% Similarity=0.246 Sum_probs=245.2
Q ss_pred CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCC-CCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8867425552576777776442100113234-311122302320321112100147311134443232222233245664
Q gi|254781103|r 252 NLQPIRLALDLRIQNIVHQELVENKKKYNAE-SVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMG 330 (598)
Q Consensus 252 ~g~dI~lTID~~lQ~~~e~~l~~~~~~~~a~-~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePG 330 (598)
T Consensus 263 ~~~~I~tTLd~~lQr~lE~~ar~~~~~l~~~~saAvlvvD~~t~eVla~VGS~d~fd~~r~G~i------dm~~a~RSPG 336 (733)
T COG4953 263 KGDIIVTTLDANLQRRLEEQARDYASRLGPRNSAAVLVVDNRTMEVLAYVGSADFFDASRSGHI------DMVRALRSPG 336 (733)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCC------CCEEEECCCC
T ss_conf 9881565017558999999999998514876642699996577405788425455673213634------3113303885
Q ss_pred CCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCC
Q ss_conf 32012356544302403204421336763222101123454-32300399985503671235432023333200110122
Q gi|254781103|r 331 SIFKVFTIAMGIDSGLFTVKDLFDTRNPIKVGKHVIHDYHP-QNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRL 409 (598)
Q Consensus 331 StfKp~t~aaaLe~g~i~~~~~~~~~~~~~~~~~~i~~~~~-~~g~it~~~al~~S~Nv~~~~i~~~lg~~~~~~~~~~f 409 (598)
T Consensus 337 StLKPFiY~LA~D~GLI~p~Tll~D~-P~~fg~YrP~Nfd~~F~G~VsvreAL~~SLNiPAV~lLe~~gp~rf~~rl~~a 415 (733)
T COG4953 337 STLKPFVYGLAFDQGLIHPETLLKDV-PTRFGDYRPENFDSNFHGPVSVREALIKSLNIPAVRLLEAVGPPRFAARLRQA 415 (733)
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHC
T ss_conf 30003665543014654653114678-70106758866665566740099999874386299999873939899999967
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCCCCCCCCHH
Q ss_conf 25763446865421111223355441001146875213001002211001107823010899986307885032018999
Q gi|254781103|r 410 GLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKN 489 (598)
Q Consensus 410 G~g~~t~idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~~~~vis~~ 489 (598)
T Consensus 416 g~~----L~~P~~~~~----------GLsLiLG-g~gi~L~dLa~lYa~lAn~G~~~~L~~~---~~~~~~~~~~l~s~~ 477 (733)
T COG4953 416 GVH----LYLPEGAAP----------GLSLILG-GAGITLEDLAQLYAALANQGKAGPLRDT---LDDDPLTERTLLSPG 477 (733)
T ss_pred CCC----CCCCCCCCC----------CEEEEEC-CCCCCHHHHHHHHHHHHCCCCEECCCCC---CCCCCCCCCCCCCCC
T ss_conf 998----778976688----------7258855-7766499999999998618943104346---787888786356860
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCCC-EEEEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCC
Q ss_conf 9999999999873388464104797-357667240351268876688621799999742888099999980788888887
Q gi|254781103|r 490 TVKTMRSLLREGVTGGSGRRAFVPG-FEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIKERNQ 568 (598)
Q Consensus 490 ~a~~l~~~l~~vv~~GTg~~a~~~g-~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~~~v~V~v~~p~~~~~~~ 568 (598)
T Consensus 478 Aaw~i~dIl~~~~~P~~~~~~~-~~~~piawKTGTSy---------GyRDAWsvG~~g----~Y~l~VWvGr~dg~~~~g 543 (733)
T COG4953 478 AAWQILDILSDVARPGLPNGAL-PSVRPIAWKTGTSY---------GYRDAWSVGVFG----RYVLGVWVGRFDGTPVPG 543 (733)
T ss_pred HHHHHHHHHHCCCCCCCCCCCC-CCCCCEEEECCCCC---------CCCCCEEECCCC----CEEEEEEEECCCCCCCCC
T ss_conf 2799999985047988656676-65665057427766---------653314632358----658999974799984776
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 43214678999999999999818
Q gi|254781103|r 569 LTAGINVAPMVGNIIRRSASMLG 591 (598)
Q Consensus 569 ~~Gg~~AaPi~~~I~~~~~~~~~ 591 (598)
T Consensus 544 ~~G~~~AaPLlf~v~~~-~~~~~ 565 (733)
T COG4953 544 LSGVATAAPLLFQVNNI-IARSG 565 (733)
T ss_pred CCCHHHHHHHHHHHHHH-HHCCC
T ss_conf 01423456789988888-64266