HHsearch alignment for GI: 254781103 and conserved domain: PRK11397

Probab=97.80  E-value=5.8e-06  Score=56.72  Aligned_cols=112  Identities=17%  Similarity=0.216  Sum_probs=76.5

Q ss_pred             CCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH---HHHCCCEECCCCCCCCC
Q ss_conf             343111223023203211121001473111344432322222332456643201235654---43024032044213367
Q gi|254781103|r  281 AESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAM---GIDSGLFTVKDLFDTRN  357 (598)
Q Consensus       281 a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aa---aLe~g~i~~~~~~~~~~  357 (598)
T Consensus        36 i~A~sailiD~~TG~vLy~k-------------------N--~d~~~~pAS~TKlMT~~v~~e~i~~g~l~~d~~v~vs~   94 (390)
T PRK11397         36 IDAGSWVLMDYTTGQILTAG-------------------N--EHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGR   94 (390)
T ss_pred             CCCEEEEEEECCCCCEEEEE-------------------C--CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECH
T ss_conf             55339999999999692012-------------------9--29984877999999999999999739999786599638


Q ss_pred             CC-CCCCCC-CCC---CCCCCCCCCHHH----HHHCCCCCEEEEEEECCCC------CCCHHHCCCCCCCC
Q ss_conf             63-222101-123---454323003999----8550367123543202333------32001101222576
Q gi|254781103|r  358 PI-KVGKHV-IHD---YHPQNRILTIPE----IFRYSSNIGAAQIADAMGI------QGHKEFLYRLGLLS  413 (598)
Q Consensus       358 ~~-~~~~~~-i~~---~~~~~g~it~~~----al~~S~Nv~~~~i~~~lg~------~~~~~~~~~fG~g~  413 (598)
T Consensus        95 ~a~~~~~~~~~g~s~~~l~~Ge~~tv~dLl~~lli~SaNDAa~aLAe~i~Gs~~~Fv~~MN~kAk~lG~~n  165 (390)
T PRK11397         95 DAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYVEKLHLKD  165 (390)
T ss_pred             HHHHCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             78741487657872242158989999999999887442399999997527999999999999999858987