HHsearch alignment for GI: 254781103 and conserved domain: PRK11636
>PRK11636 mrcA peptidoglycan synthetase; Provisional.
Probab=100.00 E-value=0 Score=429.35 Aligned_cols=269 Identities=22% Similarity=0.312 Sum_probs=216.5
Q ss_pred CCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCC-
Q ss_conf 3111223023203211121001473111344432322222332456643201235654430240320442133676322-
Q gi|254781103|r 283 SVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGIDSGLFTVKDLFDTRNPIKV- 361 (598)
Q Consensus 283 ~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaLe~g~i~~~~~~~~~~~~~~- 361 (598)
T Consensus 426 q~AlV~iDp~tG~V~A~vGG~d~~~---------s~fNrA~qa~RQpGStfKPfvYaaAle~G-~t~~t~v~D~-Pi~~~ 494 (850)
T PRK11636 426 NSALVSINPQNGAVMALVGGFDFNQ---------SKFNRATQALRQVGSNIKPFLYTAAMDKG-LTLASMLNDV-PISRW 494 (850)
T ss_pred CCEEEEEECCCCCEEEEECCCCCCC---------CCCCHHHHCCCCCCCCHHHHHHHHHHHCC-CCCCCEECCC-CCEEE
T ss_conf 1217986067783467516756421---------13225443444788651789999999749-9964450587-71230
Q ss_pred -----CCCCCCCCCC-CCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -----2101123454-3230039998550367123543202333320011012225763446865421111223355441
Q gi|254781103|r 362 -----GKHVIHDYHP-QNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELPEIQAPSYPSQWKRIH 435 (598)
Q Consensus 362 -----~~~~i~~~~~-~~g~it~~~al~~S~Nv~~~~i~~~lg~~~~~~~~~~fG~g~~t~idlp~e~~g~~p~~~~~~~ 435 (598)
T Consensus 495 ~~~~g~~w~P~N~~~~~~G~vtlr~AL~~S~N~~aVrl~~~vG~~~~~~~~~~~Gi~~~---~~~--------------~ 557 (850)
T PRK11636 495 DAGAGSDWRPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQ---NIV--------------H 557 (850)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCCCC---CCC--------------C
T ss_conf 27888866700799883886999999984847999999998696999999998499855---667--------------6
Q ss_pred CEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCCC---------------------------------
Q ss_conf 00114687521300100221100110782301089998630788503---------------------------------
Q gi|254781103|r 436 SLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVS--------------------------------- 482 (598)
Q Consensus 436 ~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~~--------------------------------- 482 (598)
T Consensus 558 ~~slaLG-s~~vtplema~AYatfAN~G~~~~P~~I~kI~D~~G~vi~~~~p~~~~~~~~~pv~~~~~~~~~~~~~~~~~ 636 (850)
T PRK11636 558 TESLALG-SASFTPMQVARGYAVMANGGFLVDPYFISKIENDQGGVIFEAKPKVACPECDIPVIYGDTQKSNVLENNNVE 636 (850)
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHCCCEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCHHH
T ss_conf 6320257-677679999999999973986616689999987999788743664345433433213444100110110123
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHC-----CCCEEECC--CCCEEEEEE
Q ss_conf -----------------------------------201899999999999998733-----88464104--797357667
Q gi|254781103|r 483 -----------------------------------RIVLKKNTVKTMRSLLREGVT-----GGSGRRAF--VPGFEVGGK 520 (598)
Q Consensus 483 -----------------------------------~~vis~~~a~~l~~~l~~vv~-----~GTg~~a~--~~g~~vaGK 520 (598)
T Consensus 637 ~v~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~vi~~~~a~lm~~~l~~~v~~~~g~~GTg~~a~~~l~~~~~AGK 716 (850)
T PRK11636 637 DVAISQEQQNSSVPMPQLEQANQALVAQNGAQEYAPHVINTPLAFLIKSALNTNIFGEPGWMGTGWRAGRDLKRRDIGGK 716 (850)
T ss_pred HHHHCCCCCCCCCCCHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEE
T ss_conf 32201223334566302321120122102221134201236889999999862013565567608887750479965257
Q ss_pred CCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCC---------------CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 2403512688766886217999997428880999999807888---------------8888743214678999999999
Q gi|254781103|r 521 TGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKI---------------KERNQLTAGINVAPMVGNIIRR 585 (598)
Q Consensus 521 TGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~~~v~V~v~~p~~---------------~~~~~~~Gg~~AaPi~~~I~~~ 585 (598)
T Consensus 717 TGTTn---------~~~DaWFvGytp----~~~~~VWvG~Dd~~~~lg~~~~~g~~~~~~~~~~~g~~~a~piW~~~M~~ 783 (850)
T PRK11636 717 TGTTN---------SSKDAWFSGYGP----GVVTSVWIGFDDHRRNLGRTTASGAIKDQISGYEGGAKSAQPAWDAYMKA 783 (850)
T ss_pred CCCCC---------CCCCEEEECCCC----CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 77679---------971279962579----95899997015886645654445555555556554336679999999999
Q ss_pred HHHHCCCC
Q ss_conf 99981899
Q gi|254781103|r 586 SASMLGVK 593 (598)
Q Consensus 586 ~~~~~~i~ 593 (598)
T Consensus 784 a~~~~~~~ 791 (850)
T PRK11636 784 VLEGVPEQ 791 (850)
T ss_pred HHCCCCCC
T ss_conf 97269978