HHsearch alignment for GI: 254781103 and conserved domain: TIGR02071
>TIGR02071 PBP_1b penicillin-binding protein 1B; InterPro: IPR011813 Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in Escherichia coli and other Proteobacteria, designated penicillin-binding protein 1B.; GO: 0008233 peptidase activity, 0008955 peptidoglycan glycosyltransferase activity, 0009252 peptidoglycan biosynthetic process, 0046677 response to antibiotic, 0009274 peptidoglycan-based cell wall.
Probab=100.00 E-value=0 Score=347.82 Aligned_cols=297 Identities=17% Similarity=0.228 Sum_probs=250.2
Q ss_pred CCCCCCCCEEEEHHHHHHHHHHHHHHHCCCC--------CCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 6768867425552576777776442100113--------23431112230232032111210014731113444323222
Q gi|254781103|r 249 GEKNLQPIRLALDLRIQNIVHQELVENKKKY--------NAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFN 320 (598)
Q Consensus 249 ~~~~g~dI~lTID~~lQ~~~e~~l~~~~~~~--------~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~N 320 (598)
T Consensus 371 ~~~~G~~iFTtlD~~~Q~~aE~av~~~~~~L~~~kG~~~~~LEaAmvv~D~~~GEvrA~vGg---------~~p~f~GFN 441 (742)
T TIGR02071 371 KDLSGLRIFTTLDPVSQSAAEQAVKETIPALKKKKGKKLKDLEAAMVVVDRFTGEVRALVGG---------RDPQFAGFN 441 (742)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECC---------CCCCCCCCH
T ss_conf 54578778843797899999987876457888750678885317788983688707888758---------788756010
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHC-CCEECCCCCCCCCCCCCC-----CCCCCCCCC-CCCCCCHHHHHHCCCCCEEEEE
Q ss_conf 223324566432012356544302-403204421336763222-----101123454-3230039998550367123543
Q gi|254781103|r 321 RISYGIFEMGSIFKVFTIAMGIDS-GLFTVKDLFDTRNPIKVG-----KHVIHDYHP-QNRILTIPEIFRYSSNIGAAQI 393 (598)
Q Consensus 321 ra~~~~yePGStfKp~t~aaaLe~-g~i~~~~~~~~~~~~~~~-----~~~i~~~~~-~~g~it~~~al~~S~Nv~~~~i 393 (598)
T Consensus 442 RAl~A~R~iGSL~KP~vYLtALs~P~~Y~LnTw~~d~-P~~ik~~~G~~W~P~N~D~~~~g~V~L~dALa~S~N~pTV~l 520 (742)
T TIGR02071 442 RALQARRQIGSLVKPAVYLTALSQPDKYRLNTWIEDQ-PLSIKLSNGQVWSPRNYDRRYSGTVMLYDALARSLNIPTVNL 520 (742)
T ss_pred HHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC-CEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH
T ss_conf 3641637764324368999972789731146642366-447756888724651477422562646789876531767886
Q ss_pred EECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEE
Q ss_conf 20233332001101222576344686542111122335544100114687521300100221100110782301089998
Q gi|254781103|r 394 ADAMGIQGHKEFLYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIR 473 (598)
Q Consensus 394 ~~~lg~~~~~~~~~~fG~g~~t~idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~ 473 (598)
T Consensus 521 Gm~vGl~~V~~t~~~LG~~k~~---------------i~~~--PsmlLG-A~~ltP~evaq~YQtlAsgG~~~pL~avRS 582 (742)
T TIGR02071 521 GMKVGLDKVSQTLKKLGINKDE---------------IPPV--PSMLLG-AISLTPYEVAQLYQTLASGGERAPLSAVRS 582 (742)
T ss_pred HHHCCHHHHHHHHHHHCCCCCC---------------CCCC--CHHHHC-CCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 4631767899999982877120---------------4766--335521-136687899989977625775543102201
Q ss_pred EECCCCCCC-------CCCCCHH--HHHHHHHHHHHHHCCCCEEECCC--C-CEEEEEECCEEEECCCCCCCCCCCEEEE
Q ss_conf 630788503-------2018999--99999999998733884641047--9-7357667240351268876688621799
Q gi|254781103|r 474 SREESEKVS-------RIVLKKN--TVKTMRSLLREGVTGGSGRRAFV--P-GFEVGGKTGTAQKVIKKRYSDTLNFNSF 541 (598)
Q Consensus 474 ~~~~~~~~~-------~~vis~~--~a~~l~~~l~~vv~~GTg~~a~~--~-g~~vaGKTGTAq~~~~g~y~~~~~~~~F 541 (598)
T Consensus 583 Vl~~dG~vLy~~~~~~~~~~p~~svAaylt~~AMQqvV~~GTaRsL~~~~~~~l~LAGKTGTt---------Nd~RDsWF 653 (742)
T TIGR02071 583 VLDEDGKVLYQSLPQAEQAVPSQSVAAYLTLYAMQQVVQRGTARSLGADFPSSLSLAGKTGTT---------NDSRDSWF 653 (742)
T ss_pred EECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCC---------CCCCCEEE
T ss_conf 011477633017887454577420357767778775420120110010046665654563656---------88851047
Q ss_pred EEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9997428880999999807888888874321467899999999999
Q gi|254781103|r 542 LAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSA 587 (598)
Q Consensus 542 vG~~P~~dP~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~I~~~~~ 587 (598)
T Consensus 654 ~G~----dG~~~~~~W~GR-D~N~~TkLtGAsGAl~vy~~yL~~~~ 694 (742)
T TIGR02071 654 VGI----DGKEVTIVWLGR-DDNGPTKLTGASGALQVYKRYLKYQT 694 (742)
T ss_pred EEE----CCCEEEEEEEEC-CCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 764----387899999852-78988476453158999999985258