HHsearch alignment for GI: 254781103 and conserved domain: TIGR02073
>TIGR02073 PBP_1c penicillin-binding protein 1C; InterPro: IPR011815 This entry contains penicillin binding proteins includes the member from Escherichia coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this entry are presumed to have the same basic function..
Probab=100.00 E-value=0 Score=357.09 Aligned_cols=304 Identities=19% Similarity=0.234 Sum_probs=250.0
Q ss_pred CCCEEEEHHHHHHHHHHHHHHHCCCCCCC---CCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 67425552576777776442100113234---311122302320321112100147311134443232222233245664
Q gi|254781103|r 254 QPIRLALDLRIQNIVHQELVENKKKYNAE---SVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMG 330 (598)
Q Consensus 254 ~dI~lTID~~lQ~~~e~~l~~~~~~~~a~---~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePG 330 (598)
T Consensus 254 s~i~sTlD~~LQ~~~E~~~~~~~~~l~~~gi~~~A~lVvD~~s~~V~A~vGS~df~d--~---~~~gqVD-~v~A~RSpG 327 (786)
T TIGR02073 254 SKIVSTLDADLQRRLEELARRYLSALRPRGISNLAILVVDNRSGAVLAYVGSADFFD--D---SNAGQVD-GVRAIRSPG 327 (786)
T ss_pred CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCC--C---CCCEEEE-EEECCCCCC
T ss_conf 736762474479999999999998618688302578899717982699982456766--1---3050461-476676678
Q ss_pred CCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCC----CCCCCCCC-CCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHH
Q ss_conf 320123565443024032044213367632221----01123454-3230039998550367123543202333320011
Q gi|254781103|r 331 SIFKVFTIAMGIDSGLFTVKDLFDTRNPIKVGK----HVIHDYHP-QNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEF 405 (598)
Q Consensus 331 StfKp~t~aaaLe~g~i~~~~~~~~~~~~~~~~----~~i~~~~~-~~g~it~~~al~~S~Nv~~~~i~~~lg~~~~~~~ 405 (598)
T Consensus 328 StLKPFlYaLald~G~~~p~slL~D~-P~~fg~~SG~Y~P~Nf~~~F~G~V~v~~AL~~SLNiPAV~ll~~~g~~~f~~~ 406 (786)
T TIGR02073 328 STLKPFLYALALDDGLIHPDSLLKDV-PLRFGDVSGLYAPENFDKTFHGPVPVREALARSLNIPAVRLLERLGPPRFASF 406 (786)
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHC-CHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHH
T ss_conf 64318999856565211201010101-21014723332678877764677639998643067148999974292689999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCC------
Q ss_conf 01222576344686542111122335544100114687521300100221100110782301089998630788------
Q gi|254781103|r 406 LYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESE------ 479 (598)
Q Consensus 406 ~~~fG~g~~t~idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~------ 479 (598)
T Consensus 407 L~~~G~~~~~------------~~~~-~~yGLSL~LG-G~e~tL~dLa~lY~~LA~~G~~~plr~~~~~~~~~~~~~~ke 472 (786)
T TIGR02073 407 LRQAGLKLLK------------PKSR-DYYGLSLILG-GAEITLQDLANLYAMLANQGLSGPLRFLQADAKRPEREESKE 472 (786)
T ss_pred HHHHCCCCCC------------HHHH-CCCCCEEEEC-CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9970565578------------0000-2576013123-017448999999999974266657421335456764124666
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHHCC-CCEE-E-CCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEE
Q ss_conf -5032018999999999999987338-8464-1-0479735766724035126887668862179999974288809999
Q gi|254781103|r 480 -KVSRIVLKKNTVKTMRSLLREGVTG-GSGR-R-AFVPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVL 555 (598)
Q Consensus 480 -~~~~~vis~~~a~~l~~~l~~vv~~-GTg~-~-a~~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~~~v~ 555 (598)
T Consensus 473 Gnf~~rll~~~aa~~~~diL~~~~~p~~~~~~~~~~~~~~~~AwKTGTSy---------G~RDAWa~G~~~----~Yti~ 539 (786)
T TIGR02073 473 GNFGTRLLSPGAAWIVLDILKDRPRPEDTLPKSSALSTRLPLAWKTGTSY---------GFRDAWAAGVSG----RYTIG 539 (786)
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCC---------CCCCCEEEECCC----CEEEE
T ss_conf 76688757888899999996037884211310023556653577626647---------872216861058----76899
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 998078888888743214678999999999999818
Q gi|254781103|r 556 SFMDSPKIKERNQLTAGINVAPMVGNIIRRSASMLG 591 (598)
Q Consensus 556 V~v~~p~~~~~~~~~Gg~~AaPi~~~I~~~~~~~~~ 591 (598)
T Consensus 540 VWvGn~~G~p~~~~~G~~~AaPllf~i~d~l~~~~~ 575 (786)
T TIGR02073 540 VWVGNFDGKPNPGFIGAAAAAPLLFDILDALQASEA 575 (786)
T ss_pred EEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCC
T ss_conf 974568999996402002344379999999763355