HHsearch results for GI: 254781103 and protein with PDBid: 1ci9_A

Probab=96.88  E-value=0.0013  Score=40.40  Aligned_cols=87  Identities=10%  Similarity=0.094  Sum_probs=50.3

Q ss_pred             EEEHH-HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             55525-76777776442100113234311122302320321112100147311134443232222233245664320123
Q gi|254781103|r  258 LALDL-RIQNIVHQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVF  336 (598)
Q Consensus       258 lTID~-~lQ~~~e~~l~~~~~~~~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~  336 (598)
                      .++|. .++..+++.+.+.+++....+++++|+  +.|+|+.--++-.-|.   .  ...++   .....|..||+-|+|
T Consensus        11 ~~~~~~~l~a~ld~~~~~~~~~~~~pG~~v~V~--~~G~~v~~~~~G~ad~---~--~~~p~---t~~T~f~iaSvtK~~   80 (392)
T 1ci9_A           11 FSLDAASLAARLDAVFDQALRERRLVGAVAIVA--RHGEILYRRAQGLADR---E--AGRPM---REDTLFRLASVTKPI   80 (392)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTTSCSEEEEEEE--ETTEEEEEEEEEEEET---T--TTEEC---CTTCBEECGGGHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE--ECCEEEEEEEEEEECC---C--CCCCC---CCCCEEEEEEHHHHH
T ss_conf             688989999999999999998089864999999--9999999984765144---5--59989---999879713179999


Q ss_pred             HHHHHH---HCCCEECCCCCC
Q ss_conf             565443---024032044213
Q gi|254781103|r  337 TIAMGI---DSGLFTVKDLFD  354 (598)
Q Consensus       337 t~aaaL---e~g~i~~~~~~~  354 (598)
                      |+++++   |+|.+++++.+.
T Consensus        81 ta~~i~~Lve~G~l~ldd~v~  101 (392)
T 1ci9_A           81 VALAVLRLVARGELALDAPVT  101 (392)
T ss_dssp             HHHHHHHHHHHTSSCTTSBGG
T ss_pred             HHHHHHHHHHCCCCCCCCCCC
T ss_conf             999999999779866777411