HHsearch results for GI: 254781103 and protein with PDBid: 1k55_A
>1k55_A Beta lactamase OXA-10; antibiotic resistance, carbamylation, hydrolase; HET: KCX SO4; 1.39A {Pseudomonas aeruginosa} SCOP: e.3.1.1 PDB: 1e4d_A* 1ewz_A 1k54_A* 1e3u_A* 1k56_A* 1k57_A* 3lce_A* 1k4f_A* 1k4e_A* 1k6r_A* 1k6s_A* 2wgv_A* 2wgw_A* 1fof_A 1e3u_D 2hpb_A 2hp9_A 2hp6_A 2wgi_A* 2rl3_A* ...
Probab=100.00 E-value=0 Score=346.19 Aligned_cols=229 Identities=15% Similarity=0.119 Sum_probs=181.3
Q ss_pred CCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCC
Q ss_conf 34311122302320321112100147311134443232222233245664320123565443024032044213367632
Q gi|254781103|r 281 AESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGIDSGLFTVKDLFDTRNPIK 360 (598)
Q Consensus 281 a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaLe~g~i~~~~~~~~~~~~~ 360 (598)
+..|++|+|||+||++++ +| .||+.+ .||||||||||++++|||+|++++++.+.|.+...
T Consensus 16 ~~~G~~v~~d~~tg~~~~------~~------------~~ra~~-~~~PGStfKp~~~~aaLe~G~i~~~~~~~~~~g~~ 76 (246)
T 1k55_A 16 AVNGVFVLCKSSSKSCAT------ND------------LARASK-EYLPASTFKIPNAIIGLETGVIKNEHQVFKWDGKP 76 (246)
T ss_dssp TCCEEEEEEESSTTSEEE------SC------------HHHHTC-CBCCGGGGHHHHHHHHHHTTSSCSTTCEECCCSCC
T ss_pred CCCEEEEEEECCCCCEEE------EC------------HHHHHC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 783589999899996886------37------------667626-87997438999999999808999744553689956
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 22101123454323003999855036712354320233332001101222576344686542111122335544100114
Q gi|254781103|r 361 VGKHVIHDYHPQNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTIS 440 (598)
Q Consensus 361 ~~~~~i~~~~~~~g~it~~~al~~S~Nv~~~~i~~~lg~~~~~~~~~~fG~g~~t~idlp~e~~g~~p~~~~~~~~~~~~ 440 (598)
+. ++.++|.+|+++||++|||++|+++++++|++.+.+++++||||++ ++|++.. .. .
T Consensus 77 ---~~---~~~~~g~~tl~~Al~~S~N~~~~~l~~~lG~~~~~~~~~~~G~g~~---~~~~~~~----~~---------~ 134 (246)
T 1k55_A 77 ---RA---MKQWERDLTLRGAIQVSAVPVFQQIAREVGEVRMQKYLKKFSYGNQ---NISGGID----KF---------W 134 (246)
T ss_dssp ---CS---SGGGSSCEEHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHHTTCTTC---CCCSCTT----TT---------T
T ss_pred ---CC---CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCC---CCCCCCC----CH---------H
T ss_conf ---67---6777999799999997482999999998398999999998399988---7888765----34---------4
Q ss_pred CCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEE
Q ss_conf 68752130010022110011078230108999863078850320189999999999999873388464104797357667
Q gi|254781103|r 441 FGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTMRSLLREGVTGGSGRRAFVPGFEVGGK 520 (598)
Q Consensus 441 ~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~~~~vis~~~a~~l~~~l~~vv~~GTg~~a~~~g~~vaGK 520 (598)
.++++.+||+|||++|++|||+|.. ++|++++.++++|+.++ .+++.++||
T Consensus 135 ~~g~~~iTPlq~a~~~~~iangg~~--------------------~sp~~~~~~~~~m~~~~---------~~g~~vagK 185 (246)
T 1k55_A 135 LEGQLRISAVNQVEFLESLYLNKLS--------------------ASKENQLIVKEALVTEA---------APEYLVHSK 185 (246)
T ss_dssp TTSSCCBCHHHHHHHHHHHHTTCSS--------------------SCHHHHHHHHHHTEEEE---------ETTEEEEEE
T ss_pred HCCCCCCCHHHHHHHHHHHHCCCCC--------------------CCHHHHHHHHHHHHHHH---------HHHHHCCCE
T ss_conf 4698655699999999999729987--------------------78899999999999877---------664221444
Q ss_pred CCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 2403512688766886217999997428880999999807888888874321467899999999999981899
Q gi|254781103|r 521 TGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSASMLGVK 593 (598)
Q Consensus 521 TGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~I~~~~~~~~~i~ 593 (598)
|||||.. ..++..++|||||+|.+||+|+++|++++|+. .+ +|++++|+++++..|||.
T Consensus 186 TGTa~~g----~~~~~~~aWFvGf~p~~~p~~~~av~i~~~~~------~~----~~~a~~i~~~il~~~g~~ 244 (246)
T 1k55_A 186 TGFSGVG----TESNPGVAWWVGWVEKETEVYFFAFNMDIDNE------SK----LPLRKSIPTKIMESEGII 244 (246)
T ss_dssp EEECCCC----CSSSCEEEEEEEEEEETTEEEEEEEEEEESCG------GG----TTHHHHHHHHHHHHTTCC
T ss_pred EEEEECC----CCCCCCCEEEEEEEECCCCEEEEEEEEECCCC------CC----CHHHHHHHHHHHHHCCCC
T ss_conf 5122205----78998538999999879985999999977998------87----588999999999972651