HHsearch results for GI: 254781103 and protein with PDBid: 1m40_A
>1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A* 1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A 1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A* 1jtg_A 1axb_A* ...
Probab=99.64 E-value=5.1e-15 Score=112.88 Aligned_cols=230 Identities=18% Similarity=0.248 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 76777776442100113234311122302320321112100147311134443232222233245664320123565443
Q gi|254781103|r 263 RIQNIVHQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGI 342 (598)
Q Consensus 263 ~lQ~~~e~~l~~~~~~~~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaL 342 (598)
.....++++. +..+++ .+++|+|..||++|+ ++|++ ..|+|+|++|+++++++|
T Consensus 3 ~~~~~i~~~~----~~~~~~-~~~~v~D~~tg~~l~-----~~n~d----------------~~~~~AS~~Kl~~~~~~l 56 (263)
T 1m40_A 3 ETLVKVKDAE----DQLGAR-VGYIELDLNSGKILE-----SFRPE----------------ERFPMMSTFKVLLCGAVL 56 (263)
T ss_dssp HHHHHHHHHH----HHHTSE-EEEEEEETTTCCEEE-----EESTT----------------SCEECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHH----HHCCCE-EEEEEEECCCCCEEE-----EECCC----------------CCCCCHHHHHHHHHHHHH
T ss_conf 0899999999----844985-999999999997877-----78899----------------854457899999999999
Q ss_pred H---CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC----HHHHHHCCCCCEEEEEEECCCC-CCCHHHCCCCCCCCC
Q ss_conf 0---2403204421336763222101123454323003----9998550367123543202333-320011012225763
Q gi|254781103|r 343 D---SGLFTVKDLFDTRNPIKVGKHVIHDYHPQNRILT----IPEIFRYSSNIGAAQIADAMGI-QGHKEFLYRLGLLSK 414 (598)
Q Consensus 343 e---~g~i~~~~~~~~~~~~~~~~~~i~~~~~~~g~it----~~~al~~S~Nv~~~~i~~~lg~-~~~~~~~~~fG~g~~ 414 (598)
+ +|.+++++.+.........+.......+ +..++ +..++..|.|.....+++.+|. +.+.++++++|+..
T Consensus 57 ~~i~~g~l~~~~~i~~~~~~~~~~~~~~~~~~-g~~~t~~~ll~~mi~~SdN~Aa~~L~~~~gg~~~~~~~~~~~g~~~- 134 (263)
T 1m40_A 57 SRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHL-TDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHV- 134 (263)
T ss_dssp HHHHTTSCCTTCEECCCGGGCCSCCTTGGGCT-TTCEEHHHHHHHHHHSCCHHHHHHHHHHHTSHHHHHHHHHHTTCSS-
T ss_pred HHHHCCCCCCCCEEEEEHHHCCCCCCCEECCC-CCCEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHH-
T ss_conf 98652777877479984200237997301268-9816499999998862867999999998469348999999835466-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCCCCCCCCHHHHHHH
Q ss_conf 44686542111122335544100114687521300100221100110782301089998630788503201899999999
Q gi|254781103|r 415 LETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTM 494 (598)
Q Consensus 415 t~idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~~~~vis~~~a~~l 494 (598)
+.++.+.. ... . ....+.....||.+|+..+..+.++ +.++++....+
T Consensus 135 ~~~~~~~~---~~~-~-------~~~~~~~~~~Ta~d~a~ll~~l~~~---------------------~~~~~~~~~~~ 182 (263)
T 1m40_A 135 TRLDRWEP---ELN-E-------AIPNDERDTTTPAAMATTLRKLLTG---------------------ELLTLASRQQL 182 (263)
T ss_dssp CCCCCCTT---GGG-C-------CCTTCCTTEECHHHHHHHHHHHHHS---------------------TTSCHHHHHHH
T ss_pred HHCCCCCC---CCC-C-------CCCCCCCCCCCHHHHHHHHHHHHHC---------------------CCCCHHHHHHH
T ss_conf 65168877---666-8-------9999876740899999999999838---------------------84688889999
Q ss_pred HHHHHHHHCCCCEEECC-CCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEE-ECCCCEEEEEEEEECCC
Q ss_conf 99999873388464104-7973576672403512688766886217999997-42888099999980788
Q gi|254781103|r 495 RSLLREGVTGGSGRRAF-VPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVF-PTTDPQYIVLSFMDSPK 562 (598)
Q Consensus 495 ~~~l~~vv~~GTg~~a~-~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~-P~~dP~~~v~V~v~~p~ 562 (598)
.++|.........-.+. .+++.+|+||||... ... ..+|+. |-+.+.|+++|+..++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~p~~~~v~~KTG~~~~-------~~~---~~~~iv~~~g~~~~ivvv~~~~~~ 242 (263)
T 1m40_A 183 IDWMEADKVAGPLLRSALPAGWFIADKSGAGER-------GSR---GIIAALGPDGKPSRIVVIYTTGSQ 242 (263)
T ss_dssp HHHHHCCSSCTTTGGGGCCTTCEEEEEEEECST-------TCE---EEEEEEESTTCCCEEEEEEEESCC
T ss_pred HHHHHCCEECCHHCCCCCCCCCEEEEEECCCCC-------CCC---EEEEEEEECCCEEEEEEEECCCCC
T ss_conf 988744813600001238999648883165778-------871---499999919975999999817998