>1qme_A Penicillin-binding protein 2X; peptidoglycan synthesis, resistance, cell WALL, transmembrane; 2.4A {Streptococcus pneumoniae} SCOP: d.11.1.1 d.11.1.1 d.175.1.1 e.3.1.1 PDB: 1qmf_A* 1pyy_A* 1rp5_A 1pmd_A 1k25_A 2zc3_B* 2z2l_B* 2z2m_B* 2zc4_B* 2zc3_A* 2z2l_A* 2z2m_A* 2zc4_A* 2zc3_C* 2z2l_C* 2z2m_C* 2zc4_C*

Probab=100.00 E-value=0 Score=783.84 Aligned_cols=496 Identities=20% Similarity=0.309 Sum_probs=416.3 Q ss_pred EEECCHHHHCEEEEEEECCCCCEEECCCCEEEEEEEEEEEEEEEHHHHCC-------------HHHHHHHHHHHHCCCCH Q ss_conf 34415323210004665179974576487081686977999997338099-------------89999999888079998 Q gi|254781103|r 96 GNIHPEPIAPSMNIDEYGMSRPDIIDRNGEILATDIPTFSLYVEPHKVIS-------------PDEIIEKLQIVLPNLDS 162 (598) Q Consensus 96 q~~~~~~~~~~~~~~~i~a~RG~I~DRNG~~LA~n~~~y~i~i~P~~i~~-------------~~~~~~~L~~il~~~~~ 162 (598) ..+..++..++.+...++|.||.||||||++||+|.+.|+|+++|....+ .+++++.|+.++ +++. T Consensus 8 ~~l~~~a~~~~~~~~~ipa~RG~I~DrnG~~LA~~~~~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~ 86 (702) T 1qme_A 8 TDLAKEAKKVHQTTRTVPAKRGTIYDRNGVPIAEDATSYNVYAVIDENYKSATGKILYVEKTQFNKVAEVFHKYL-DMEE 86 (702) T ss_dssp ---------------CCCCCCCCEECTTSCEEEEEECC------------------------------------------ T ss_pred HHHHHHHHHHHEEEEEECCCCCCEEECCCCEEECCEEEEEEEEECCHHHCCCHHHHCCCCHHHHHHHHHHHHHHC-CCCH T ss_conf 999999986038887971789838908999885030674899987332111101110124667999999988760-9999 Q ss_pred HHHHHHHHCC----CCEEEEECCCCHHHHH----HHHHHHCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCC-------- Q ss_conf 9999985136----7628961379999999----97631013750120233332100000011111124687-------- Q gi|254781103|r 163 EMIRRKLSSE----TKFQWLRRKLSPQQQK----RILSFGLPGVGFRLEKSRFYPAASHASHVVGYVDIDNR-------- 226 (598) Q Consensus 163 ~~i~~~l~~~----~~~~~i~r~is~~~~~----~I~~~~lpGi~~~~~~~R~YP~~~lashiiGyv~~d~~-------- 226 (598) +.+.+++... ..|.+..++++.+... ++..+++|||.+.++++|+||++++++|+|||++.++. T Consensus 87 ~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~~l~Gi~~~~~~~R~YP~~~~as~viG~v~~~~~~~~~~~~i 166 (702) T 1qme_A 87 SYVREQLSQPNLKQVSFGAKGNGITYANMMSIKKELEAAEVKGIDFTTSPNRSYPNGQFASSFIGLAQLHENEDGSKSLL 166 (702) T ss_dssp -------------------------------------------------CEEECTTSSSSHHHHCCEEEEECTTSCEEEE T ss_pred HHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECEEEECCCCCCHHCEECCCCCCCCCCCCCCHH T ss_conf 99999975533033101002257789999999998876789957743060367888510320314343333333200212 Q ss_pred CCCCCEEECCCCC-----CCEEEEC------------CCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE Q ss_conf 5123100014668-----5168953------------6667688674255525767777764421001132343111223 Q gi|254781103|r 227 GITGIEKFLDMQG-----LTRVFTT------------NKGEKNLQPIRLALDLRIQNIVHQELVENKKKYNAESVGTVIL 289 (598) Q Consensus 227 G~~GlE~~~d~~g-----~~~~~~~------------~~~~~~g~dI~lTID~~lQ~~~e~~l~~~~~~~~a~~gavVvm 289 (598) |++|||++||..+ ....+.+ ...+.+|.||+||||.++|+.+|++|.+.++..++++|++|+| T Consensus 167 G~~GlE~~~d~~L~G~~g~~~~~~~~~g~~~~~~~~~~~~~~~G~~I~lTID~~lQ~~~e~~l~~~~~~~~~~~g~~Vvm 246 (702) T 1qme_A 167 GTSGMESSLNSILAGTDGIITYEKDRLGNIVPGTEQVSQRTMDGKDVYTTISSPLQSFMETQMDAFQEKVKGKYMTATLV 246 (702) T ss_dssp ECSHHHHHTHHHHHCBCC---------------------CCBCCCEEEESCCHHHHHHHHHHHHHHHHHHCCSEEEEEEE T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 27888888787538988864211013685211333233467899735997789999999999999998616752379999 Q ss_pred ECCCHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCC Q ss_conf 0232032111210014731113444-323222223324566432012356544302403204421336763222101123 Q gi|254781103|r 290 NVSTGEVISMVSIPDYDPHEAFKGK-KEGWFNRISYGIFEMGSIFKVFTIAMGIDSGLFTVKDLFDTRNPIKVGKHVIHD 368 (598) Q Consensus 290 d~~TGeILAmas~P~~dpn~~~~~~-~~~~~Nra~~~~yePGStfKp~t~aaaLe~g~i~~~~~~~~~~~~~~~~~~i~~ 368 (598) ||+||+||||||+|+||||.+.... ...|.|+++++.||||||||||++++|||+|.+++++.++|. .+.+++..++| T Consensus 247 d~~TG~IlAmas~p~~d~n~~~~~~~~~~~~~~~~~~~~~PGStfK~~t~aaALe~g~~~~~~~~~~~-~~~~~~~~~~~ 325 (702) T 1qme_A 247 SAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFNSS-ELKIADATIRD 325 (702) T ss_dssp ETTTCBEEEEEEESCCCTTTCTTCCTTCCCCCTTTSCCBCCGGGGHHHHHHHHHHTTCCCTTCEEECS-CEEETTEEECC T ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECC-CCEECCCCCCC T ss_conf 77899089983257777554434563222025310112577520229989999976973233023013-40436852102 Q ss_pred CC-----CCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC Q ss_conf 45-----4323003999855036712354320233332001101222576344686542111122335544100114687 Q gi|254781103|r 369 YH-----PQNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGH 443 (598) Q Consensus 369 ~~-----~~~g~it~~~al~~S~Nv~~~~i~~~lg~~~~~~~~~~fG~g~~t~idlp~e~~g~~p~~~~~~~~~~~~~Gq 443 (598) |+ .++|.+|+++||++|||++|+++++++|.+.+.+++++|||++++++|+|+|..|.+|. |...++++++||| T Consensus 326 ~~~~~~~~~~G~itl~~al~~S~N~~~~~l~~~lG~~~~~~~~~~fG~g~~t~i~~~~e~~g~~p~-~~~~~~a~~~~Gq 404 (702) T 1qme_A 326 WDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKFGVPTRFGLTDEYAGQLPA-DNIVNIAQSSFGQ 404 (702) T ss_dssp HHHHTTSCSCCEEEHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHHTTTTSCCCCSSSSCCCCBCCC-SSHHHHHHGGGTC T ss_pred CCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHCC T ss_conf 446766778720013441252337125666542584367889886078866688875345776876-5533333143079 Q ss_pred CCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCC--------CCCCCCHHHHHHHHHHHHHHHC---------CCC Q ss_conf 52130010022110011078230108999863078850--------3201899999999999998733---------884 Q gi|254781103|r 444 GLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKV--------SRIVLKKNTVKTMRSLLREGVT---------GGS 506 (598) Q Consensus 444 g~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~--------~~~vis~~~a~~l~~~l~~vv~---------~GT 506 (598) ++++||||||++|++|||+|.+++||+|+++.+.++.+ .+++++++++..++++|+.|+. .|| T Consensus 405 ~~~vTPlqma~ayaaiANgG~~~~P~lV~~I~d~~g~~i~~~~~~~~~~~is~~~a~~~~~~m~~vv~~~~~gt~~~~gt 484 (702) T 1qme_A 405 GISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPVSKDAASLTRTNMVLVGTDPVYGTMYNHST 484 (702) T ss_dssp SCBBCHHHHHHHHHHHHTTTCEECCBCEEEEEETTTTEEEECCCCEEECCSCHHHHHHHHHHHHHHHHCTTTCTTEETTT T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCEEECCCC T ss_conf 86679999999999997198596108999998699978740487335766899999999999998622245540312677 Q ss_pred EE-ECCCCCEEEEEECCEEEECC--CCCCCC--CCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHH Q ss_conf 64-10479735766724035126--887668--86217999997428880999999807888888874321467899999 Q gi|254781103|r 507 GR-RAFVPGFEVGGKTGTAQKVI--KKRYSD--TLNFNSFLAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGN 581 (598) Q Consensus 507 g~-~a~~~g~~vaGKTGTAq~~~--~g~y~~--~~~~~~FvG~~P~~dP~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~ 581 (598) |+ .+.++||+|||||||||+.. .++|.. ..+++||+||||++||+|+|+|+|++|+.. .+.+||.+|+|||++ T Consensus 485 g~~~a~~~g~~vaGKTGTAq~~~~~~~~~~~~~~~~~~sfvg~~P~~~P~~~~~V~v~~p~~~--~g~~gg~va~pi~~~ 562 (702) T 1qme_A 485 GKPTVTVPGQNVALKSGTAQIADEKNGGYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPEHY--SGIQLGEFANPILER 562 (702) T ss_dssp TEESSCBTTBCCEEEEEEEECBCGGGSSBCCSTTCEEEEEEEEESSSSCSEEEEEEEESCSSC--CHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCEEEEEEEEEECCCCCEEEEEEEECCCCC--CCCCHHHHHHHHHHH T ss_conf 754436899789999950302477788410156550699999978799819999999788866--787215899999999 Q ss_pred HH--HHHHHHCCCCCCC Q ss_conf 99--9999981899855 Q gi|254781103|r 582 II--RRSASMLGVKPVF 596 (598) Q Consensus 582 I~--~~~~~~~~i~P~~ 596 (598) |+ ...+++..++|+. T Consensus 563 i~~~~~~l~~~~~~~~~ 579 (702) T 1qme_A 563 ASAMKDSLNLQTTAKAL 579 (702) T ss_dssp HHHHHHHCCCC------ T ss_pred HHHHHHHCCCCCCCCCH T ss_conf 98765220367778633

HHsearch results for GI: 254781103 and protein with PDBid: 1qme_A