HHsearch results for GI: 254781103 and protein with PDBid: 1w5d_A

>1w5d_A Penicillin-binding protein; D-Ala-D-Ala-carboxypeptidase, peptidoglycan, beta-lactam, hydrolase, peptidoglycan synthesis; 2.1A {Bacillus subtilis} SCOP: e.3.1.3 PDB: 2j9p_A*
Probab=96.64  E-value=0.0011  Score=40.77  Aligned_cols=52  Identities=17%  Similarity=0.141  Sum_probs=34.0

Q ss_pred             EEEEECCEEEECCCCCCCCCCCEEEEEEEEECCC-CEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             5766724035126887668862179999974288-80999999807888888874321467899999999999981
Q gi|254781103|r  516 EVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTD-PQYIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSASML  590 (598)
Q Consensus       516 ~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~d-P~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~I~~~~~~~~  590 (598)
                      .|-+||||=.           ....++||....+ ..|+++++++++..        .    .-.+.++++++..|
T Consensus       407 ~v~aKTGTL~-----------~v~aLaGyv~t~~G~~~~Fsi~~N~~~~--------~----~~~r~~~d~i~~~L  459 (462)
T 1w5d_A          407 KVRAKTGSLS-----------TVSSLSGYAETKSGKKLVFSILLNGLID--------E----EDGKDIEDQIAVIL  459 (462)
T ss_dssp             TEEEEEEEET-----------TEEEEEEEEECSSSCEEEEEEEEESCSS--------G----GGHHHHHHHHHHHH
T ss_pred             EEEEEEEEEC-----------CCEEEEEEEECCCCCEEEEEEEECCCCC--------H----HHHHHHHHHHHHHH
T ss_conf             4999975238-----------9468589999899899999999579997--------5----77899999999998