HHsearch results for GI: 254781103 and protein with PDBid: 1xp4_A
>1xp4_A D-alanyl-D-alanine carboxypeptidase; five-stranded antiparallel beta-sheet, omega-like loop, hydrolase; 2.80A {Streptococcus pneumoniae R6} SCOP: b.105.1.1 e.3.1.1
Probab=98.21 E-value=5.6e-07 Score=61.78 Aligned_cols=112 Identities=17% Similarity=0.214 Sum_probs=74.1
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH---HCCCEECCCCCCCC
Q ss_conf 234311122302320321112100147311134443232222233245664320123565443---02403204421336
Q gi|254781103|r 280 NAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGI---DSGLFTVKDLFDTR 356 (598)
Q Consensus 280 ~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaL---e~g~i~~~~~~~~~ 356 (598)
+-.+-++||||..||+||.- +-....++|+|+-|.+|+..+| ++|.+++++.+..+
T Consensus 11 ~i~A~saiv~d~~tG~iL~~---------------------kn~~~~~~pASlTKlMTa~v~le~i~~g~i~l~~~v~vs 69 (379)
T 1xp4_A 11 TIAAKHAIAVEANTGKILYE---------------------KDATQPVEIASITKLITVYLVYEALENGSITLSTPVDIS 69 (379)
T ss_dssp CCSBSSEEEEETTTTEEEEE---------------------ESCSSCEECGGGGHHHHHHHHHHHHHHTSSCTTCEEECC
T ss_pred CCCCCEEEEEECCCCCEEEE---------------------ECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 74445899999999979145---------------------590998878899999999999999876999988479945
Q ss_pred CC-CCCC-CCCCCCCCCCCCCCCHHH----HHHCCCCCEEEEEEECCCC------CCCHHHCCCCCCC
Q ss_conf 76-3222-101123454323003999----8550367123543202333------3200110122257
Q gi|254781103|r 357 NP-IKVG-KHVIHDYHPQNRILTIPE----IFRYSSNIGAAQIADAMGI------QGHKEFLYRLGLL 412 (598)
Q Consensus 357 ~~-~~~~-~~~i~~~~~~~g~it~~~----al~~S~Nv~~~~i~~~lg~------~~~~~~~~~fG~g 412 (598)
.. +... +.........+..+++++ .|..|.|-.+.-||+.++. +.+.+.++++|+.
T Consensus 70 ~~~~~~~~~~~~s~~~~~G~~~tv~dLl~~lli~S~NdAA~aLA~~i~Gs~~~Fv~~MN~kA~elGm~ 137 (379)
T 1xp4_A 70 DYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSANSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQ 137 (379)
T ss_dssp HHHHHTTTSCCSSCCCCTTCEEEHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 89986327865310102786167999999998863788999999982683999999999999980996