HHsearch results for GI: 254781103 and protein with PDBid: 2iwb_A
>2iwb_A Methicillin resistance MECR1 protein; antibiotic resistance, bacterial antibiotic resistance, methicillin resistance, beta-lactamic antibiotics, MRSA; 1.8A {Staphylococcus aureus} PDB: 2iwc_A* 2iwd_A*
Probab=100.00 E-value=0 Score=354.61 Aligned_cols=242 Identities=12% Similarity=0.162 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 25767777764421001132343111223023203211121001473111344432322222332456643201235654
Q gi|254781103|r 261 DLRIQNIVHQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAM 340 (598)
Q Consensus 261 D~~lQ~~~e~~l~~~~~~~~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aa 340 (598)
|...|.++++.|.+....+++..|++|++|++||+|++ ||+ +|+. ..||||||||||++++
T Consensus 1 d~~~~~~~~~~~~~~~~~f~~~~G~~v~~d~~tg~~~~------~n~------------~~~~-~~y~PGStfK~~t~~a 61 (246)
T 2iwb_A 1 DKYETNVSYKKLNQLAPYFKGFDGSFVLYNEREQAYSI------YNE------------PESK-QRYSPNSTYKIYLALM 61 (246)
T ss_dssp CBCCCCCCEEECGGGGGGGTTSEEEEEEEETTTTEEEE------ESH------------HHHT-BCBCCGGGGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEE------ECH------------HHHC-CCCCCCCHHHHHHHHH
T ss_conf 90277774999999998717873469999789996760------588------------8966-8779963699999999
Q ss_pred HHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCC
Q ss_conf 43024032044213367632221011234543230039998550367123543202333320011012225763446865
Q gi|254781103|r 341 GIDSGLFTVKDLFDTRNPIKVGKHVIHDYHPQNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELP 420 (598)
Q Consensus 341 aLe~g~i~~~~~~~~~~~~~~~~~~i~~~~~~~g~it~~~al~~S~Nv~~~~i~~~lg~~~~~~~~~~fG~g~~t~idlp 420 (598)
|||+|++++++.++|++..... .+.++|.+++++||++|||++|+++++++|.+++.+++++|||+++ +++
T Consensus 62 aLe~g~~~~~~~~~~~~~~~~~------~~~~~g~~~l~~Al~~S~N~~~~~la~~lG~~~~~~~~~~~G~g~~---~~~ 132 (246)
T 2iwb_A 62 AFDQNLLSLNHTEQQWDKHQYP------FKEWNQDQNLNSSMKYSVNWYYENLNKHLRQDEVKSYLDLIEYGNE---EIS 132 (246)
T ss_dssp HHHTTSSBTTBCCBCCCCCCCS------SGGGSSCBCHHHHHHTTCHHHHHHHHTTSCHHHHHHHHHHHTCTTC---CCC
T ss_pred HHHCCCCCCCCCCCCCCCCCCC------CCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCC---CCC
T ss_conf 9984997885434169986617------8988997077884224562999999987286078999998289999---889
Q ss_pred CCCCCCCCCCCCCCCCEECCCCCC-CEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 421111223355441001146875-2130010022110011078230108999863078850320189999999999999
Q gi|254781103|r 421 EIQAPSYPSQWKRIHSLTISFGHG-LSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTMRSLLR 499 (598)
Q Consensus 421 ~e~~g~~p~~~~~~~~~~~~~Gqg-~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~~~~vis~~~a~~l~~~l~ 499 (598)
++ ..++||| +++||+|||++|++|||+|.. +++++++.++++|+
T Consensus 133 ~~---------------~~~~~~g~~~iTPlqma~~~~~ian~g~~--------------------~~p~~~~~~~~~~~ 177 (246)
T 2iwb_A 133 GN---------------ENYWNESSLKISAIEQVNLLKNMKQHNMH--------------------FDNKAIEKVENSMT 177 (246)
T ss_dssp SC---------------SSTTSSSSCCBCHHHHHHHHHHHHTTCSS--------------------SCHHHHHHHHHHTE
T ss_pred CC---------------CCCCCCCCCCCCHHHHHHHHHHHHHCCCC--------------------CCCHHHHHHHHHHH
T ss_conf 87---------------64222687525699999999999838967--------------------88325567777777
Q ss_pred HHHCCCCEEECCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHH
Q ss_conf 87338846410479735766724035126887668862179999974288809999998078888888743214678999
Q gi|254781103|r 500 EGVTGGSGRRAFVPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMV 579 (598)
Q Consensus 500 ~vv~~GTg~~a~~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~ 579 (598)
.+ ..+++.++|||||++. .+...++||+||+|.+||+|+++|+|++|+ ..|+..|+||+
T Consensus 178 ~~---------~~~~~~~~~ktgTg~~------~~~~~~aWFvGf~p~~~p~~~~~v~v~~~~------~~~~~~A~pi~ 236 (246)
T 2iwb_A 178 LK---------QKDTYKYVGKTGTGIV------NHKEANGWFVGYVETKDNTYYFATHLKGED------NANGEKAQQIS 236 (246)
T ss_dssp EE---------ECSSEEEEEEEEEEEE------TTEEEEEEEEEEEEESSCEEEEEEEEECSS------CBCHHHHHHHH
T ss_pred HH---------HHHHHHHHHCCCCCCC------CCCCCCEEEEEEEECCCCEEEEEEEEECCC------CCCCHHHHHHH
T ss_conf 76---------5423443211010446------898878899999988999599999997899------88747899999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254781103|r 580 GNIIRRS 586 (598)
Q Consensus 580 ~~I~~~~ 586 (598)
++|++.+
T Consensus 237 ~~Il~~l 243 (246)
T 2iwb_A 237 ERILKEM 243 (246)
T ss_dssp HHHHHHT
T ss_pred HHHHHHC
T ss_conf 9999971