HHsearch results for GI: 254781103 and protein with PDBid: 2pby_A
>2pby_A Glutaminase; secsg, riken, structural genomics, PSI, protein structure initiative; 2.07A {Geobacillus kaustophilus HTA426}
Probab=96.00 E-value=0.019 Score=32.96 Aligned_cols=216 Identities=14% Similarity=0.109 Sum_probs=111.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHC-CCEECCCCCCC-CCCCCCCCCC-CCC--CCCCCCCCCHHHHHHCCCCCEEEEEEECCC
Q ss_conf 324566432012356544302-40320442133-6763222101-123--454323003999855036712354320233
Q gi|254781103|r 324 YGIFEMGSIFKVFTIAMGIDS-GLFTVKDLFDT-RNPIKVGKHV-IHD--YHPQNRILTIPEIFRYSSNIGAAQIADAMG 398 (598)
Q Consensus 324 ~~~yePGStfKp~t~aaaLe~-g~i~~~~~~~~-~~~~~~~~~~-i~~--~~~~~g~it~~~al~~S~Nv~~~~i~~~lg 398 (598)
...|..-|+-|||+++.||++ |.-.....+-. |....++.-. ..+ -++++ ++-=..||.-++=+.-....++
T Consensus 58 ~~~FsiqSisK~f~~~~al~~~G~~~V~~~VG~ePSg~~FNsl~~le~~~g~P~N-PmINaGAI~~~sll~~~~~~~r-- 134 (308)
T 2pby_A 58 TVKVTLQSISKIIALALVLIDRGEDEVFHKVGMEPTDYPFHSIAKLEEKPAKPLN-PMINAGALVVTSMIQGGSVSER-- 134 (308)
T ss_dssp TCCEECTTHHHHHHHHHHHHHHHHHHHHHHBCSCC----------------CCBC-TTSHHHHHHHHTTSCSSSHHHH--
T ss_pred CCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCC-CCCCCCHHHHHHHCCCCCHHHH--
T ss_conf 8867689999999999999987989999985768787997145541023899789-6442018898660036883789--
Q ss_pred CCCCHHHCCCCCCCCCCCCCCC---CCC---------------CCCCCCCCCCCCCEECCCCC-CCEEEHHHCCCCCCHH
Q ss_conf 3320011012225763446865---421---------------11122335544100114687-5213001002211001
Q gi|254781103|r 399 IQGHKEFLYRLGLLSKLETELP---EIQ---------------APSYPSQWKRIHSLTISFGH-GLSTTPLQTAVAAAAL 459 (598)
Q Consensus 399 ~~~~~~~~~~fG~g~~t~idlp---~e~---------------~g~~p~~~~~~~~~~~~~Gq-g~~~TPlqla~~~ati 459 (598)
.+.+.++++++-=.++..+|-. .|. .|.++.+- -+....=|=| .+.+|.-+||.+.+++
T Consensus 135 ~~~il~~~~~lag~~~~~~d~~v~~SE~~t~~rN~Ala~~Lk~~g~i~~d~--~~~Ld~Yf~~Csi~~t~~dLA~~aatL 212 (308)
T 2pby_A 135 LERLLAFVRRLAGNERISYSDEVARSEFETAFLNRSLCYFLKQHRIIDEDV--EELMELYTKQCAIEMTCIDLARIGLVL 212 (308)
T ss_dssp HHHHHHHHHHHHTCTTCCBCHHHHHHHHHHCHHHHHHHHHHHHTTSCCSCH--HHHHHHHHHHHTBEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCH--HHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 999999999984899764369999876306399999999998579978899--999999999838522499999999999
Q ss_pred HHCCEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCEEECCCCCEEEEEECCEEEECCCCCCCCCCCE
Q ss_conf 1078230108999863078850320189999999999999873-388464104797357667240351268876688621
Q gi|254781103|r 460 INEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTMRSLLREGV-TGGSGRRAFVPGFEVGGKTGTAQKVIKKRYSDTLNF 538 (598)
Q Consensus 460 AN~G~~~~P~lv~~~~~~~~~~~~~vis~~~a~~l~~~l~~vv-~~GTg~~a~~~g~~vaGKTGTAq~~~~g~y~~~~~~ 538 (598)
||+|+. +...++++++++++.+...|...- -+.+|.-++--|.+ +|+|.+
T Consensus 213 An~G~~-------------P~tg~~vi~~~~~r~v~s~M~tcGmYd~SG~fa~~VGlP--aKSGVg-------------- 263 (308)
T 2pby_A 213 ALDGRD-------------PHSSEPLMPLDVARICKTFMVTCGMYNSSGEFAIKVGIP--AKSGVS-------------- 263 (308)
T ss_dssp HTTTBC-------------TTTCCBSSCHHHHHHHHHHHHHSSSTTCHHHHHHHTCSC--EEECTT--------------
T ss_pred HCCCCC-------------CCCCCEECCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC--CCCCCC--------------
T ss_conf 678948-------------887773368899999999997558842302379980862--112577--------------
Q ss_pred EEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 79999974288809999998078888888743214678999999
Q gi|254781103|r 539 NSFLAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGNI 582 (598)
Q Consensus 539 ~~FvG~~P~~dP~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~I 582 (598)
.-.++..|- ++.++||= |.- ...|.++++--+-+-
T Consensus 264 GgIlavvPg---~~gIav~S--P~L----D~~GNSv~G~~~le~ 298 (308)
T 2pby_A 264 GGILAAVPG---RCGIGVFG--PAL----DDKGNSLTGVKLLER 298 (308)
T ss_dssp SEEEEEETT---TEEEEEEC--CCB----CTTSSBHHHHHHHHH
T ss_pred CEEEEEECC---CEEEEEEC--CCC----CCCCCCHHHHHHHHH
T ss_conf 438999579---60899989--886----888886999999999