HHsearch results for GI: 254781103 and protein with PDBid: 2v2f_F
>2v2f_F Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc6_B* 2zc5_B* 2c6w_B 2c5w_B*
Probab=100.00 E-value=0 Score=502.02 Aligned_cols=321 Identities=17% Similarity=0.167 Sum_probs=265.3
Q ss_pred CCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCC---CCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76886742555257677777644210011323---431112230232032111210014731113444323222223324
Q gi|254781103|r 250 EKNLQPIRLALDLRIQNIVHQELVENKKKYNA---ESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGI 326 (598)
Q Consensus 250 ~~~g~dI~lTID~~lQ~~~e~~l~~~~~~~~a---~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~ 326 (598)
.+.|.+|+||||.++|+.+|+++.+......+ .++++|||||+||+||||++.|+|++|... ..||++++.
T Consensus 29 ~~~G~~I~tTiD~~~Q~~~e~~l~~~~~~~~~~~~~~~a~vv~d~~TG~IlA~vg~~~~~~~~~~------~~N~a~~~~ 102 (390)
T 2v2f_F 29 LTTGMDVYTNVDQEAQKHLWDIYNSDQYVSYPDDDLQVASTVVDVSNGKVIAQLGARHQASNVSF------GTNQAVETN 102 (390)
T ss_dssp TTSCEEEEECCCHHHHHHHHHHHHSSSSCCCSSSCCEEEEEEEETTTTEEEEEECCCC-----CC------CCCTTTCCC
T ss_pred HCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCC------CCCHHHHCC
T ss_conf 46998899478899999999999753442167877048999998899949999967877767655------643222056
Q ss_pred CCCCCCCHHHH-HHHHHHCCCEECCCCCCCCCCC--CCCCCCCCCCCC-CCCCCCHHHHHHCCCCCEEEEEEECCCCCCC
Q ss_conf 56643201235-6544302403204421336763--222101123454-3230039998550367123543202333320
Q gi|254781103|r 327 FEMGSIFKVFT-IAMGIDSGLFTVKDLFDTRNPI--KVGKHVIHDYHP-QNRILTIPEIFRYSSNIGAAQIADAMGIQGH 402 (598)
Q Consensus 327 yePGStfKp~t-~aaaLe~g~i~~~~~~~~~~~~--~~~~~~i~~~~~-~~g~it~~~al~~S~Nv~~~~i~~~lg~~~~ 402 (598)
||||||||||+ +++|||+|++++++.+.|+.++ ..++++++||+. ++|.+|+++||++|||++|+++++++|.+.+
T Consensus 103 ~~pGStfKp~~~~aaale~g~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~G~vtl~~Al~~S~N~~~~~l~~~~G~~~~ 182 (390)
T 2v2f_F 103 RDWGSAMKPITDYAPAIEYGVYDSTATMVNDIPYNYPGTSTPVYNWDRAYFGNITLQYALQQSRNVTAVETLNKVGLDRA 182 (390)
T ss_dssp SCCGGGGHHHHTHHHHHHTTSCSBTTCEEEESCEECTTSSCEECCTTSCCCEEEEHHHHHHTTCHHHHHHHHHHHCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHCCCHHH
T ss_conf 68874177999999999769866640575267610157998743079985774229999986330378899875392789
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCC-
Q ss_conf 0110122257634468654211112233554410011468752130010022110011078230108999863078850-
Q gi|254781103|r 403 KEFLYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKV- 481 (598)
Q Consensus 403 ~~~~~~fG~g~~t~idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~- 481 (598)
.+++++|||..+. +..+. ........+|+++.+||||||++|++|||+|.+++||+|+++.+.++..
T Consensus 183 ~~~~~~~g~~~~~------~~~~~------~~~~~~~~~~g~~~vtplqma~ayaaiaN~G~~~~P~~v~~i~d~~g~~~ 250 (390)
T 2v2f_F 183 KTFLNGLGIDYPS------MHYAN------AISSNTTESNKQYGASSEKMAAAYAAFANGGIYHKPMYINKVVFSDGSKK 250 (390)
T ss_dssp HHHHHTTTCCCSS------CCGGG------GSCSCSSCCCTTSSCCHHHHHHHHHHHHTTSEECCCBCEEEEEETTSCEE
T ss_pred HHHHHHCCCCCCC------CCCCC------CCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEECCEEEEEEEECCCCCE
T ss_conf 9999982999876------44442------22321110586404589999999999864986706788777985488600
Q ss_pred -----CCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEEEECCCCCC------CCCCCEEEEEEEEECCCC
Q ss_conf -----320189999999999999873388464104797357667240351268876------688621799999742888
Q gi|254781103|r 482 -----SRIVLKKNTVKTMRSLLREGVTGGSGRRAFVPGFEVGGKTGTAQKVIKKRY------SDTLNFNSFLAVFPTTDP 550 (598)
Q Consensus 482 -----~~~vis~~~a~~l~~~l~~vv~~GTg~~a~~~g~~vaGKTGTAq~~~~g~y------~~~~~~~~FvG~~P~~dP 550 (598)
.++++++++++.++++|+.||++|||+++++++++|||||||||......+ .....++||+|| +|
T Consensus 251 ~~~~~~~~v~~~~~a~~~~~~l~~vv~~GT~~~a~~~~~~vaGKTGTaq~~~~~~~~~~~~~~~~~~d~wfvG~----~P 326 (390)
T 2v2f_F 251 EFSDVGTRAMKETTAYMMTEMMKTVLAYGTGRGAYLPWLAQAGKTGTSNYTDDEIEKHIKNTGYVAPDEMFVGY----TR 326 (390)
T ss_dssp ECCCCCEECSCHHHHHHHHHHHHHHHHTSTTGGGCCTTSCCEEEEEECCCCC-----------CCBSEEEEEEE----CS
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE----CC
T ss_conf 22564434553899999999876460267631102799707898147667777653334556777664699997----89
Q ss_pred EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 099999980788888887432146789999999999998189
Q gi|254781103|r 551 QYIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSASMLGV 592 (598)
Q Consensus 551 ~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~I~~~~~~~~~i 592 (598)
+|+++|||++++.......+|+.+|||||++||+.++..+..
T Consensus 327 ~~~~~VwvG~~~~~~~~~~~G~~~aapi~~~i~~~~~~~~~~ 368 (390)
T 2v2f_F 327 KYSMAVWTGYSNRLTPIVGDGFLVAAKVYRSMITYLSEGSNP 368 (390)
T ss_dssp SEEEEEEEECSSTTSCBCGGGGGHHHHHHHHHHHHHHTTC-C
T ss_pred CEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 979999994179988868873279999999999999636997