HHsearch results for GI: 254781103 and protein with PDBid: 3cjm_A

>3cjm_A Putative beta-lactamase; NP_815223.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Enterococcus faecalis V583}
Probab=99.11  E-value=5.7e-10  Score=80.79  Aligned_cols=228  Identities=19%  Similarity=0.196  Sum_probs=132.5

Q ss_pred             HHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---CC
Q ss_conf             764421001132343111223023203211121001473111344432322222332456643201235654430---24
Q gi|254781103|r  269 HQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGID---SG  345 (598)
Q Consensus       269 e~~l~~~~~~~~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaLe---~g  345 (598)
                      .+.|...++.+.+. -++.++|.+||++.+.      |+                ...|+|+|++|.++++++|+   +|
T Consensus        38 ~~~~~a~~~~~~g~-~~v~~~dl~tg~~~~~------n~----------------~~~~~~AS~~Kl~~~~~~l~~v~~G   94 (282)
T 3cjm_A           38 NDLLVASVKEFEGT-VGISYLDLETGEQRSV------NG----------------QHEFYTASTIKVPLTMLVADTVASG   94 (282)
T ss_dssp             HHHHHHHHHHCSSE-EEEEEEETTTCCEEEE------ST----------------TCCEECGGGGHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCE-EEEEEEECCCCCEEEE------CC----------------CCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             89999999717984-9999998999988888------89----------------9842218889999999999999749


Q ss_pred             CEECCCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHH----HHHCCCCCEEEEEEECCCCC-CCHHHCCCCCCCCCCCCCC
Q ss_conf             0320442133676-3222101123454323003999----85503671235432023333-2001101222576344686
Q gi|254781103|r  346 LFTVKDLFDTRNP-IKVGKHVIHDYHPQNRILTIPE----IFRYSSNIGAAQIADAMGIQ-GHKEFLYRLGLLSKLETEL  419 (598)
Q Consensus       346 ~i~~~~~~~~~~~-~~~~~~~i~~~~~~~g~it~~~----al~~S~Nv~~~~i~~~lg~~-~~~~~~~~fG~g~~t~idl  419 (598)
                      .+++++.+.+... ...++..+-... .+..+++++    .+..|.|+....+++.+|.. .+...+...|+......  
T Consensus        95 ~l~l~~~v~~~~~~~~~~~~~~~~~~-~g~~~sl~dLl~~mi~~SdN~Aan~L~~~lGg~~~~~~~~~~~g~~~~~~~--  171 (282)
T 3cjm_A           95 QKKWTDLIPYNAEEDYEEGTGIIAYN-IQPEYPLKTLQEYAITYSDNIAKNMLYDTLGGDAKAKREMYQRYLHKTPSI--  171 (282)
T ss_dssp             SCCTTCEEECCHHHHCCCSSCSGGGS-CCSEEEHHHHHHHHHHTCCHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCCS--
T ss_pred             CCCCCCCEEECHHHHCCCCCCCEEEC-CCCEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC--
T ss_conf             98877726861899615898625725-898266999999999841269999999982984999999997057668875--


Q ss_pred             CCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             54211112233554410011468752130010022110011078230108999863078850320189999999999999
Q gi|254781103|r  420 PEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTMRSLLR  499 (598)
Q Consensus       420 p~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~~~~vis~~~a~~l~~~l~  499 (598)
                                             ..-..||-+|+..+..+..+.                     ..+++... +...|.
T Consensus       172 -----------------------~~~~~T~~d~~~ll~~l~~~~---------------------~~~~~~~~-l~~~l~  206 (282)
T 3cjm_A          172 -----------------------EEPQFSSEDALVILQKLYTEK---------------------ATKPDYQA-IYDSMK  206 (282)
T ss_dssp             -----------------------SSCEECHHHHHHHHHHHHHHT---------------------TTCHHHHH-HHHHHH
T ss_pred             -----------------------CCCCCCHHHHHHHHHHHHCCC---------------------CCCHHHHH-HHHHHH
T ss_conf             -----------------------567778999999999997487---------------------78868999-999984


Q ss_pred             HHHCCCCEEECCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHH
Q ss_conf             87338846410479735766724035126887668862179999974288809999998078888888743214678999
Q gi|254781103|r  500 EGVTGGSGRRAFVPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMV  579 (598)
Q Consensus       500 ~vv~~GTg~~a~~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~  579 (598)
                      ...... .-.+.++...||.|||+-.         ..  .-.+|+.-.++| |+++|+...|..         ..+.-++
T Consensus       207 ~~~~~~-~l~~~lp~~~va~KtG~~~---------~~--~~d~giV~~~~~-yiiav~t~~~~~---------~~~~~~i  264 (282)
T 3cjm_A          207 QSVFHE-RMETPTTQGKVAHKIGSYD---------EF--IHDMGILETPHP-FALAIFTKGPDN---------AKSAAFI  264 (282)
T ss_dssp             SCSCCC-TTCCTTTTTSEEEEEEEET---------TE--EEEEEEECSSSC-EEEEEEEECSCH---------HHHHHHH
T ss_pred             CCCCCC-CHHCCCCCCCEEEEECCCC---------CC--EEEEEEEECCCC-EEEEEEECCCCH---------HHHHHHH
T ss_conf             477873-1102588780686202657---------70--478999957998-899999479980---------7899999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999998
Q gi|254781103|r  580 GNIIRRSASM  589 (598)
Q Consensus       580 ~~I~~~~~~~  589 (598)
                      ++|.+.+..|
T Consensus       265 ~~is~~iy~~  274 (282)
T 3cjm_A          265 ASVTDKLWQL  274 (282)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
T ss_conf             9999999997