HHsearch results for GI: 254781103 and protein with PDBid: 3fwm_A
>3fwm_A Penicillin-binding protein 1B; bacterial cell WALL synthesis, antibiotics design, transferase, hydrolase; HET: M0E; 2.16A {Escherichia coli} PDB: 3fwl_A*
Probab=100.00 E-value=0 Score=457.55 Aligned_cols=295 Identities=17% Similarity=0.218 Sum_probs=243.3
Q ss_pred CCCCCCEEEEHHHHHHHHHHHHHHHCCCC------CCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68867425552576777776442100113------234311122302320321112100147311134443232222233
Q gi|254781103|r 251 KNLQPIRLALDLRIQNIVHQELVENKKKY------NAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISY 324 (598)
Q Consensus 251 ~~g~dI~lTID~~lQ~~~e~~l~~~~~~~------~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~ 324 (598)
..|..|+||||+++|+.+|+++.+.+... +...|++|+|||+||+||||++.|+|+++. +||+++
T Consensus 380 ~~Gl~I~TTLD~~lQ~~ae~al~~~l~~~~~~~~~~~~~gA~Vv~Dp~TGeIlAmvGg~~~~~~~---------fNra~~ 450 (751)
T 3fwm_A 380 LSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAG---------YNRAMQ 450 (751)
T ss_dssp SSSCEEEECCCHHHHHHHHHHHHHHHHHHHHHHTCSCCEEEEEEEETTTCBEEEEECSSSCSSCS---------SCHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCC---------CCCHHC
T ss_conf 68827982168899999999887404321223456666358999868999789996444234455---------550001
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCE-ECCCCCCCCCCCCC--CC---CCCCCCCC---CCCCCCHHHHHHCCCCCEEEEEEE
Q ss_conf 24566432012356544302403-20442133676322--21---01123454---323003999855036712354320
Q gi|254781103|r 325 GIFEMGSIFKVFTIAMGIDSGLF-TVKDLFDTRNPIKV--GK---HVIHDYHP---QNRILTIPEIFRYSSNIGAAQIAD 395 (598)
Q Consensus 325 ~~yePGStfKp~t~aaaLe~g~i-~~~~~~~~~~~~~~--~~---~~i~~~~~---~~g~it~~~al~~S~Nv~~~~i~~ 395 (598)
+.++|||+||||++++||++|.+ ++++.+.+ .++.+ ++ +..++++. ++|.+++++||++|||+++++++.
T Consensus 451 a~r~pGSt~KP~~y~aAL~~g~~~~~~t~~~D-~p~~~~~~~g~~~~p~n~d~~~~~~G~v~l~~AL~~S~N~~~v~l~~ 529 (751)
T 3fwm_A 451 ARRSIGSLAKPATYLTALSQPKIYRLNTWIAD-APIALRQPNGQVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLGM 529 (751)
T ss_dssp CCEECGGGGHHHHHHHHHTCTTTCCTTCEEEC-SCCCEECSSSCEECCCCTTSCCCTTSEEEHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCCCEEECC-CCEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH
T ss_conf 34455554541789999973887445337426-76377579985317866776657876231433434023599999988
Q ss_pred CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEE
Q ss_conf 23333200110122257634468654211112233554410011468752130010022110011078230108999863
Q gi|254781103|r 396 AMGIQGHKEFLYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSR 475 (598)
Q Consensus 396 ~lg~~~~~~~~~~fG~g~~t~idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~ 475 (598)
++|.+.+.+++++||+.......+ .++++| ++.+||||||++|++|||+|.+++||+|+++.
T Consensus 530 ~lG~~~~~~~~~k~Gi~~~~~~~~-----------------ps~~lG-~~~vTPlqmA~aYatiANgG~~~~P~~I~~I~ 591 (751)
T 3fwm_A 530 ALGLPAVTETWIKLGVPKDQLHPV-----------------PAMLLG-ALNLTPIEVAQAFQTIASGGNRAPLSALRSVI 591 (751)
T ss_dssp HHCHHHHHHHHHHHTCCGGGCCCS-----------------GGGGGT-CCEECHHHHHHHHHHHHTTSEECCCBSEEEEE
T ss_pred HHCHHHHHHHHHHCCCCCCCCCCC-----------------CHHHCC-CCCCCHHHHHHHHHHHHCCCEEECCEEEEEEE
T ss_conf 628089999999849985567898-----------------066538-86257889888999997498583568999999
Q ss_pred CCCCCC-------CCCCCCHHHHHHHHHHHHHHHCCCCEEE--CCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEE
Q ss_conf 078850-------3201899999999999998733884641--0479735766724035126887668862179999974
Q gi|254781103|r 476 EESEKV-------SRIVLKKNTVKTMRSLLREGVTGGSGRR--AFVPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFP 546 (598)
Q Consensus 476 ~~~~~~-------~~~vis~~~a~~l~~~l~~vv~~GTg~~--a~~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P 546 (598)
+.++++ .++++|+++++.++++|+.||++|||+. +..+++++||||||++ +..++||+||
T Consensus 592 d~dG~vi~~~~~~~~~vis~~tA~~v~~~M~~VV~~GTg~~~~~~~~~~~vAGKTGTT~---------~~rDaWFvG~-- 660 (751)
T 3fwm_A 592 AEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTN---------NNVDTWFAGI-- 660 (751)
T ss_dssp CTTSCEEEECCCCCEECSCHHHHHHHHHHHHHHHHTSTTHHHHHHSGGGCCEEEEEECG---------GGSEEEEEEE--
T ss_pred CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCC---------CCCEEEEEEC--
T ss_conf 89998870368977636899999999999998755567300112389975999886379---------9705999985--
Q ss_pred CCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 28880999999807888888874321467899999999999
Q gi|254781103|r 547 TTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSA 587 (598)
Q Consensus 547 ~~dP~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~I~~~~~ 587 (598)
+|+|+++|||++++.. ....+|++.|+|||+++|++..
T Consensus 661 --tp~~~~~VWvG~Ddn~-~~~~tG~~~Aapiw~~~m~~~~ 698 (751)
T 3fwm_A 661 --DGSTVTITWVGRDNNQ-PTKLYGASGAMSIYQRYLANQT 698 (751)
T ss_dssp --CSSEEEEEEEECTTCC-CCCCCTTHHHHHHHHHHHHSSC
T ss_pred --CCCEEEEEEEECCCCC-CCCCCHHHHHHHHHHHHHHCCC
T ss_conf --8996999999778999-7878445999999999996077