HHsearch results for GI: 254781103 and protein with PDBid: 3hun_A
>3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine type D-Ala, D-Ala-carboxypeptidase, antibiotics; HET: ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A*
Probab=97.72 E-value=3e-06 Score=57.15 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=74.2
Q ss_pred CCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---CCCEECCCCCCCCCCC
Q ss_conf 3111223023203211121001473111344432322222332456643201235654430---2403204421336763
Q gi|254781103|r 283 SVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGID---SGLFTVKDLFDTRNPI 359 (598)
Q Consensus 283 ~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaLe---~g~i~~~~~~~~~~~~ 359 (598)
+-++++||.+||+||.-- | ....++|+|+-|++|+..++| +|.+++++.+..+...
T Consensus 70 a~sail~da~tG~iLy~K-------------------N--~d~~~~pASlTKlMTa~l~le~i~~g~l~ld~~vtis~~a 128 (453)
T 3hun_A 70 EPTSAVNVSQTGQLLYQY-------------------N--IDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKE 128 (453)
T ss_dssp CCSEEEEEETTSBEEEEE-------------------S--TTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEECCHHH
T ss_pred CCEEEEEECCCCCEEEEE-------------------C--CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 761799998999493357-------------------8--4988584499999999999999863798821256689999
Q ss_pred -CCCCC-CCCC-CCCCCCCCCHHH----HHHCCCCCEEEEEEECCCC------CCCHHHCCCCCCCC
Q ss_conf -22210-1123-454323003999----8550367123543202333------32001101222576
Q gi|254781103|r 360 -KVGKH-VIHD-YHPQNRILTIPE----IFRYSSNIGAAQIADAMGI------QGHKEFLYRLGLLS 413 (598)
Q Consensus 360 -~~~~~-~i~~-~~~~~g~it~~~----al~~S~Nv~~~~i~~~lg~------~~~~~~~~~fG~g~ 413 (598)
..++. .... .-..|..+++++ .|..|.|-..+-||+.++. +.+.+.++++|+..
T Consensus 129 ~~~~~~~~~S~~~l~~G~~~tv~dLL~~lli~SaNdAA~aLAe~i~Gs~~~Fv~~MN~kAkeLGm~~ 195 (453)
T 3hun_A 129 YIMSTLPELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKN 195 (453)
T ss_dssp HHHTTCTTCCCCCCCTTCEEEHHHHHHHHHHSCCHHHHHHHHHHHSSSHHHHHHHHHHHHHHHTCTT
T ss_pred HHHCCCCCCCCEEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 9852588876214528979889999987677442799999999818989999999999999838988