HHsearch results for GI: 254781103 and protein with PDBid: 3mfd_A
>3mfd_A D-alanyl-D-alanine carboxypeptidase DACB; penicillin-binding protein 5*, beta-lactamase, structural GE PSI-2, protein structure initiative; HET: CIT; 1.75A {Bacillus subtilis}
Probab=98.22 E-value=7.2e-07 Score=61.10 Aligned_cols=107 Identities=19% Similarity=0.286 Sum_probs=73.3
Q ss_pred CCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCC-CC
Q ss_conf 43111223023203211121001473111344432322222332456643201235654430240320442133676-32
Q gi|254781103|r 282 ESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGIDSGLFTVKDLFDTRNP-IK 360 (598)
Q Consensus 282 ~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaLe~g~i~~~~~~~~~~~-~~ 360 (598)
..-++|+||..||+||.-- | ....++|+|+-|.+|+..+||++. +++.+..+.. +.
T Consensus 8 ~A~saiv~D~~tG~iL~~k-------------------n--~~~~~~pASlTKlmT~~v~le~~~--l~~~v~vs~~a~~ 64 (334)
T 3mfd_A 8 SAKSAIIIDGASGRVLYAK-------------------D--EHQKRRIASITKIMTAVLAIESGK--MDQTVTVSANAVR 64 (334)
T ss_dssp SCSEEEEEETTTCCEEEEE-------------------S--TTCCBCCGGGGHHHHHHHHHHTTC--TTSEEECCHHHHH
T ss_pred CCCEEEEEECCCCCCHHHC-------------------C--CCCCCCCHHHHHHHHHHHHHHCCC--CCCEEEECHHHHC
T ss_conf 3549999999999890206-------------------9--099895688999999999995889--9986998899943
Q ss_pred CCCCCCCCCCCCCCCCCHHH----HHHCCCCCEEEEEEECCCC------CCCHHHCCCCCCCC
Q ss_conf 22101123454323003999----8550367123543202333------32001101222576
Q gi|254781103|r 361 VGKHVIHDYHPQNRILTIPE----IFRYSSNIGAAQIADAMGI------QGHKEFLYRLGLLS 413 (598)
Q Consensus 361 ~~~~~i~~~~~~~g~it~~~----al~~S~Nv~~~~i~~~lg~------~~~~~~~~~fG~g~ 413 (598)
.++..+ +-..+..+++++ .|..|.|-..+-||+.++. +.+.+.++++|+..
T Consensus 65 ~~~s~~--~l~~g~~~tv~dLl~~~li~SaNdAA~aLAe~i~Gs~~~Fv~~MN~~A~~lG~~~ 125 (334)
T 3mfd_A 65 TEGSAI--YLTEGQKVKLKDLVYGLMLRSGNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKN 125 (334)
T ss_dssp CCSSCC--CCCTTCEEEHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHTCTT
T ss_pred CCCCEE--EECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 799535--3548987609999999987635779999998726978999999999999958857