PSIBLAST alignment of GI: 254781103 and protein with PDB id: 1pmd

>gi|157833527|pdb|1PMD|A Chain A, Penicillin-Binding Protein 2x (Pbp-2x) Length = 675
 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 100/548 (18%), Positives = 204/548 (37%), Gaps = 77/548 (14%)

Query: 116 RPDIIDRNGEILATDIPTFSLYVE--------PHKVISPDEI-IEKLQIVLP---NLDSE 163
           R  I DRNG  +A D  ++++Y            K++  ++    K+  V     +++  
Sbjct: 1   RGTIYDRNGVPIAEDATSYNVYAVIDENYKSATGKILYVEKTQFNKVAEVFHKYLDMEES 60

Query: 164 MIRRKLS----SETKFQWLRRKLSP----QQQKRILSFGLPGVGFRLEKSRFYPAASHAS 215
            +R +LS     +  F      ++       +K + +  + G+ F    +R YP    AS
Sbjct: 61  YVREQLSQPNLKQVSFGAKGNGITYANMMSIKKELEAAEVKGIDFTTSPNRSYPNGQFAS 120

Query: 216 HVVGYVDIDNR--------GITGIEKFLD-----MQGLTRVFTTNKGEK----------- 251
             +G   +           G +G+E  L+       G+        G             
Sbjct: 121 SFIGLAQLHENEDGSKSLLGTSGMESSLNSILAGTDGIITYEKDRLGNIVPGTEQVSQRT 180

Query: 252 -NLQPIRLALDLRIQNIVHQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEA 310
            + + +   +   +Q+ +  ++   ++K   + +   +++  TGE+++    P +D    
Sbjct: 181 MDGKDVYTTISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTK 240

Query: 311 FKGKKEG-WFNRISYGIFEMGSIFKVFTIAMGIDSGLFT----VKDLFDTRNPIKVGKHV 365
               ++  W + +    +E GS  KV  +A  ID+  F                 +    
Sbjct: 241 EGITEDFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFNSSELKIADATIRDWD 300

Query: 366 IHDYHPQNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELPEIQAP 425
           +++     R++T  + F +SSN+G   +   MG     ++L R          L +  A 
Sbjct: 301 VNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKFGVPTRFGLTDEYAG 360

Query: 426 SYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRI- 484
                   ++    SFG G+S T  Q   A  A+ N+G ++ P F+    + +++ +R  
Sbjct: 361 -QLPADNIVNIAQSSFGQGISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKS 419

Query: 485 -------VLKKNTVKTMRSLLREGVTG---GSGRR-------AFVPGFEVGGKTGTAQKV 527
                   + K+     R+ +    T    G+            VPG  V  K+GTAQ  
Sbjct: 420 QKEIVGNPVSKDAASLTRTNMVLVGTDPVYGTMYNHSTGKPTVTVPGQNVALKSGTAQIA 479

Query: 528 I--KKRYSDTLNFNSF--LAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMV--GN 581
                 Y   L    F  +++ P  +P +I+   +  P+     QL  G    P++   +
Sbjct: 480 DEKNGGYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPEHYSGIQL--GEFANPILERAS 537

Query: 582 IIRRSASM 589
            ++ S ++
Sbjct: 538 AMKDSLNL 545