PSIBLAST alignment of GI: 254781103 and protein with PDB id: 1rp5
>gi|42543579|pdb|1RP5|A Chain A, Pbp2x From Streptococcus Pneumoniae Strain 5259 With Reduced Susceptibility To Beta-Lactam Antibiotics Length = 702
>gi|42543580|pdb|1RP5|B Chain B, Pbp2x From Streptococcus Pneumoniae Strain 5259 With Reduced Susceptibility To Beta-Lactam Antibiotics Length = 702
Score = 186 bits (473), Expect = 7e-45, Method: Composition-based stats.
Identities = 99/566 (17%), Positives = 201/566 (35%), Gaps = 77/566 (13%)
Query: 98 IHPEPIAPSMNIDEYGMSRPDIIDRNGEILATDIPTFSLYVE--------PHKVISPDEI 149
+ E R I DRNG +A D ++++Y K++ ++
Sbjct: 10 LAKEAKKVHQTTRTVPAKRGTIYDRNGVPIAEDATSYNVYAVIDENYKSATGKILYVEKT 69
Query: 150 -IEKLQIVLP---NLDSEMIRRKLS----SETKFQWLRRKLSPQQQKRILSF----GLPG 197
K+ V +++ +R +LS + F ++ I + G
Sbjct: 70 QFNKVAEVFHKYLDMEESYVREQLSQPNLKQVSFGAKGNGITYANMMSIKKELETAEVKG 129
Query: 198 VGFRLEKSRFYPAASHASHVVGYVDIDNR--------GITGIEKFLD-----MQGLTRVF 244
+ F +R YP AS +G + G +G+E L+ G+
Sbjct: 130 IDFTTSPNRSYPNGQFASSFIGLAQLHENEDGSKSLLGTSGMESSLNSILAGTDGIITYE 189
Query: 245 TTNKGE------------KNLQPIRLALDLRIQNIVHQELVENKKKYNAESVGTVILNVS 292
G + + + + +Q+ + ++ ++K + + +++
Sbjct: 190 KDRLGNIVPGTEQVSQQTVDGKDVYTTISSPLQSFMETQMDAFQEKVKGKYMTATLVSAK 249
Query: 293 TGEVISMVSIPDYDPHEAFKGKKEG-WFNRISYGIFEMGSIFKVFTIAMGIDSGLFT--- 348
TGE+++ P +D ++ W + + +E GS KV +A ID+ F
Sbjct: 250 TGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGE 309
Query: 349 -VKDLFDTRNPIKVGKHVIHDYHPQNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLY 407
+ +++ R++T + F +SSN+G + MG ++L
Sbjct: 310 VFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLN 369
Query: 408 RLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIP 467
R L + A ++ +FG G+S T Q A A+ N+G ++
Sbjct: 370 RFKFGVPTRFGLTDEYAG-QLPADNIVNIAMSAFGQGISVTQTQMLRAFTAIANDGVMLE 428
Query: 468 PTFMIRSREESEKVSRI--------VLKKNTVKTMRSLLREGVTGG---------SGRR- 509
P F+ + +++ R + K R + T +G+
Sbjct: 429 PKFISALYDPNDQSVRKSQKEIVGNPVSKEAASVTRDHMVMVGTDPTYGTMYNHSTGKAT 488
Query: 510 AFVPGFEVGGKTGTAQKVI--KKRYSDTLNFNSF--LAVFPTTDPQYIVLSFMDSPKIKE 565
VPG V K+GTA+ Y N F +++ P +P +I+ + P+
Sbjct: 489 VNVPGQNVALKSGTAEIADEKNGGYLTGSTNNIFSVVSMHPAENPDFILYVTVQQPEHYS 548
Query: 566 RNQLTAGINVAPMV--GNIIRRSASM 589
QL G P++ + ++ S ++
Sbjct: 549 GIQL--GEFANPILERASAMKESLNL 572