PSIBLAST alignment of GI: 254781103 and protein with PDB id: 1rp5

>gi|42543579|pdb|1RP5|A Chain A, Pbp2x From Streptococcus Pneumoniae Strain 5259 With Reduced Susceptibility To Beta-Lactam Antibiotics Length = 702
>gi|42543580|pdb|1RP5|B Chain B, Pbp2x From Streptococcus Pneumoniae Strain 5259 With Reduced Susceptibility To Beta-Lactam Antibiotics Length = 702
 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 99/566 (17%), Positives = 201/566 (35%), Gaps = 77/566 (13%)

Query: 98  IHPEPIAPSMNIDEYGMSRPDIIDRNGEILATDIPTFSLYVE--------PHKVISPDEI 149
           +  E              R  I DRNG  +A D  ++++Y            K++  ++ 
Sbjct: 10  LAKEAKKVHQTTRTVPAKRGTIYDRNGVPIAEDATSYNVYAVIDENYKSATGKILYVEKT 69

Query: 150 -IEKLQIVLP---NLDSEMIRRKLS----SETKFQWLRRKLSPQQQKRILSF----GLPG 197
              K+  V     +++   +R +LS     +  F      ++      I        + G
Sbjct: 70  QFNKVAEVFHKYLDMEESYVREQLSQPNLKQVSFGAKGNGITYANMMSIKKELETAEVKG 129

Query: 198 VGFRLEKSRFYPAASHASHVVGYVDIDNR--------GITGIEKFLD-----MQGLTRVF 244
           + F    +R YP    AS  +G   +           G +G+E  L+       G+    
Sbjct: 130 IDFTTSPNRSYPNGQFASSFIGLAQLHENEDGSKSLLGTSGMESSLNSILAGTDGIITYE 189

Query: 245 TTNKGE------------KNLQPIRLALDLRIQNIVHQELVENKKKYNAESVGTVILNVS 292
               G              + + +   +   +Q+ +  ++   ++K   + +   +++  
Sbjct: 190 KDRLGNIVPGTEQVSQQTVDGKDVYTTISSPLQSFMETQMDAFQEKVKGKYMTATLVSAK 249

Query: 293 TGEVISMVSIPDYDPHEAFKGKKEG-WFNRISYGIFEMGSIFKVFTIAMGIDSGLFT--- 348
           TGE+++    P +D        ++  W + +    +E GS  KV  +A  ID+  F    
Sbjct: 250 TGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGE 309

Query: 349 -VKDLFDTRNPIKVGKHVIHDYHPQNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLY 407
                        +    +++     R++T  + F +SSN+G   +   MG     ++L 
Sbjct: 310 VFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLN 369

Query: 408 RLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIP 467
           R          L +  A         ++    +FG G+S T  Q   A  A+ N+G ++ 
Sbjct: 370 RFKFGVPTRFGLTDEYAG-QLPADNIVNIAMSAFGQGISVTQTQMLRAFTAIANDGVMLE 428

Query: 468 PTFMIRSREESEKVSRI--------VLKKNTVKTMRSLLREGVTGG---------SGRR- 509
           P F+    + +++  R          + K      R  +    T           +G+  
Sbjct: 429 PKFISALYDPNDQSVRKSQKEIVGNPVSKEAASVTRDHMVMVGTDPTYGTMYNHSTGKAT 488

Query: 510 AFVPGFEVGGKTGTAQKVI--KKRYSDTLNFNSF--LAVFPTTDPQYIVLSFMDSPKIKE 565
             VPG  V  K+GTA+        Y      N F  +++ P  +P +I+   +  P+   
Sbjct: 489 VNVPGQNVALKSGTAEIADEKNGGYLTGSTNNIFSVVSMHPAENPDFILYVTVQQPEHYS 548

Query: 566 RNQLTAGINVAPMV--GNIIRRSASM 589
             QL  G    P++   + ++ S ++
Sbjct: 549 GIQL--GEFANPILERASAMKESLNL 572