PSIBLAST alignment of GI: 254781103 and protein with PDB id: 2wae
>gi|224036198|pdb|2WAE|A Chain A, Penicillin-Binding Protein 2b (Pbp-2b) From Streptococcus Pneumoniae (Strain 5204) Length = 680
Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats.
Identities = 80/400 (20%), Positives = 143/400 (35%), Gaps = 61/400 (15%)
Query: 232 EKFLDMQGLTRVFTTNKGEKNLQPIRLALDLRIQNIVHQELVENKKKY-------NAESV 284
E LD G + + I+L +DL Q+ V L +E V
Sbjct: 284 EIHLDKHGDMESVENIEEGSKGKNIKLTIDLAFQDSVDALLKSYFNSELGNGGAKYSEGV 343
Query: 285 GTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGIDS 344
V LN TG V+SM + H+ G+ +F GS+ K TI+ G ++
Sbjct: 344 YAVALNPQTGAVLSMSGLK----HDLKTGELTPDSLGTVTNVFVPGSVVKAATISSGWEN 399
Query: 345 GLFTVKDLFDTRNPIKVGKHVIHDYHPQNR---ILTIPEIFRYSSNIGAAQIADAMGIQG 401
G+ + + + G I+ ++ +T E YSSN Q A + Q
Sbjct: 400 GVLSGNQTLTDQPIVFQGSAPIYSWYKLAYGSFPITAVEALEYSSNAYVVQTALGIMGQT 459
Query: 402 HKEFLY------------------RLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGH 443
++ ++ GL S +LP+ P ++ + +T +FG
Sbjct: 460 YQPNMFVGTSNLESAMGKLRSTFGEYGLGSATGIDLPDESTGLVPKEYNFANFITNAFGQ 519
Query: 444 GLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEK--------------VSRIVLKKN 489
+ TP+Q A A + N G + P + + ++K ++++ + ++
Sbjct: 520 FDNYTPMQLAQYVATIANNGVRLAPHIVEGIYDNNDKGGLGELIQAIDTKEINKVNISES 579
Query: 490 TVKTMRSLLREGVTGGSGR----RAFVPG--FEVGGKTGTAQKVIKKRYSDTLNFNSFLA 543
+ + + + G+ RAF G + GKTGT + + +A
Sbjct: 580 DMAILHQGFYQV-SHGTSPLTTGRAFSDGATVSISGKTGTGESYVAGGQEANNTNA--VA 636
Query: 544 VFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGNII 583
PT +PQ V +N A + +II
Sbjct: 637 YAPTENPQIAVAVVFPHNTNLTKNVGPA------IARDII 670