RPSBLAST alignment for GI: 254781103 and conserved domain: pfam00905
>gnl|CDD|144486 pfam00905, Transpeptidase, Penicillin binding protein transpeptidase domain. The active site serine is conserved in all members of this family. Length = 296
Score = 188 bits (480), Expect = 3e-48
Identities = 93/303 (30%), Positives = 150/303 (49%), Gaps = 13/303 (4%)
Query: 285 GTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGIDS 344
V+L+ TGEV++M P YDP KE NR ++E GS FK+FT +D+
Sbjct: 2 SAVVLDPKTGEVLAMAGKPSYDP----NRDKEPLRNRAVQDVYEPGSTFKIFTALAALDN 57
Query: 345 GLFTVKDLFDTRNPIKVGKHVIHDYH-PQNRILTIPEIFRYSSNIGAAQIADAMGIQGHK 403
G+ ++ FD + VG + I D++ + +T+ E YSSN Q+A +G +
Sbjct: 58 GILKPEETFDDWPGLPVGGYTIKDWNQDGSGTITLREALEYSSNWYFQQLALKLGKDKLR 117
Query: 404 EFLYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHG-LSTTPLQTAVAAAALINE 462
++L + G +K LP ++ R T ++G G L+ TPLQ A A A + N
Sbjct: 118 DYLKKFGYGNKTGIGLPG-ESAGILPPRYRGDGATTAWGQGSLTITPLQQAQAYATIANN 176
Query: 463 GRLIPPTFM--IRSREESEKVSRIVLKKNTVKTMRSLLREGVTGGSGRRAFVPGFEVGGK 520
G+L+PP + I+ + + + ++ + K+T + ++ +L+ V G A VPG++V GK
Sbjct: 177 GKLVPPHIVKSIKKLVDPKVLGKLPISKSTAEKVKDMLK-LVVNDGGGAAAVPGYKVAGK 235
Query: 521 TGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVG 580
TGTAQ K Y D F+ P +P+Y +D PK G AP+
Sbjct: 236 TGTAQVAGKGGYKDGTYNGWFVGYAPADNPKYAFAVLIDDPKGDGG---AGGKVAAPIFK 292
Query: 581 NII 583
+I+
Sbjct: 293 DIL 295