RPSBLAST alignment for GI: 254781103 and conserved domain: TIGR02073
>gnl|CDD|162685 TIGR02073, PBP_1c, penicillin-binding protein 1C. This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. Length = 727
Score = 42.4 bits (100), Expect = 3e-04
Identities = 60/287 (20%), Positives = 97/287 (33%), Gaps = 52/287 (18%)
Query: 256 IRLALDLRIQNIVHQELVEN----KKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEAF 311
I LD +Q + +EL + ++ ++++ +G V++ V D+
Sbjct: 244 IVSTLDADLQRRL-EELARRYLSALRPRGISNLAILVVDNRSGAVLAYVGSADFFDDSNS 302
Query: 312 KGKKEGWFNRISYGIFEMGSIFKVFTIAMGIDSGLFTVKDLFDTRNPIKVGKHVIHDYHP 371
G + + GS K F A+ +D GL L P++ G DY P
Sbjct: 303 -----GQVDGVR-APRSPGSTLKPFLYALALDDGLLHPDSLLKDV-PLRFG-----DYAP 350
Query: 372 QN------RILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELPEIQAP 425
+N + E S NI A ++ + +G +FL + G L P+
Sbjct: 351 ENFDKTFHGPVPAREALARSLNIPAVRLLERVGPPRFADFLRQAG----LNLLKPKSDYY 406
Query: 426 SYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFM-------IRSREES 478
SL + G T A A L N+G P F+ R R S
Sbjct: 407 GL--------SLALG---GAEITLQDLANLYAMLANQGLSGPLRFLQTDAKRPERERLLS 455
Query: 479 EKVSRIVLKKNTVKTMRSLLREGVTGGSGRRAFVPGFEVGGKTGTAQ 525
+ IVL ++ R A + KTGT+
Sbjct: 456 PGAAWIVL-----DILKDRPRPD--DTLPLSALPTRLPLAWKTGTSY 495