RPSBLAST alignment of GI: 254781103 and protein with PDBid: 2v2f
>2v2f_F Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc6_B* 2zc5_B* 2c6w_B 2c5w_B* Length = 390
Score = 110 bits (276), Expect = 7e-25
Identities = 57/354 (16%), Positives = 117/354 (33%), Gaps = 33/354 (9%)
Query: 256 IRLALDLRIQNIVHQELVENKKKYNAE---SVGTVILNVSTGEVISMVSIPDYDPHEAFK 312
+ +D Q + ++ + V + +++VS G+VI+ + + +F
Sbjct: 35 VYTNVDQEAQKHLWDIYNSDQYVSYPDDDLQVASTVVDVSNGKVIAQLGARHQASNVSF- 93
Query: 313 GKKEGWFNRISYGIFEMGSIFKVFTIAM-GIDSGLFTVKDLFDTRNPIKV---GKHVIHD 368
N+ + GS K T I+ G++ P V +
Sbjct: 94 -----GTNQAVETNRDWGSAMKPITDYAPAIEYGVYDSTATMVNDIPYNYPGTSTPVYNW 148
Query: 369 YHPQNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELPEIQAPSYP 428
+T+ + S N+ A + + +G+ K FL LG+
Sbjct: 149 DRAYFGNITLQYALQQSRNVTAVETLNKVGLDRAKTFLNGLGIDYP------------SM 196
Query: 429 SQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSRE------ESEKVS 482
I S T + + A A AA N G P ++ + E V
Sbjct: 197 HYANAISSNTTESNKQYGASSEKMAAAYAAFANGGIYHKPMYINKVVFSDGSKKEFSDVG 256
Query: 483 RIVLKKNTVKTMRSLLREGVTGGSGRRAFVPGFEVGGKTGTAQ--KVIKKRYSDTLNFNS 540
+K+ T M +++ + G+GR A++P GKTGT+ +++ + +
Sbjct: 257 TRAMKETTAYMMTEMMKTVLAYGTGRGAYLPWLAQAGKTGTSNYTDDEIEKHIKNTGYVA 316
Query: 541 FLAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSASMLGVKP 594
+F +Y + + + A + ++I + +
Sbjct: 317 PDEMFVGYTRKYSMAVWTGYSNRLTPIVGDGFLVAAKVYRSMITYLSEGSNPED 370