RPSBLAST alignment of GI: 254781103 and protein with PDBid: 2wad

>2wad_A Penicillin-binding protein 2B; peptidoglycan synthesis, transmembrane, antibiotic resistance, cell shape, peptidoglycan, cell membrane; 2.18A {Streptococcus pneumoniae} PDB: 2wae_A 2waf_A Length = 680
 Score =  109 bits (271), Expect = 2e-24
 Identities = 89/565 (15%), Positives = 173/565 (30%), Gaps = 101/565 (17%)

Query: 88  LAIRIIQYGNIHPEPIAPSMNIDEYGMSRPDIIDRNGEILATDIPTFSLYVEPHKVISPD 147
           +A +++ Y +I    +      D Y    P+I  +  E L ++    S      +    +
Sbjct: 96  IAKKLLTYVSISSPNLTERQLADYYLAD-PEIYKKTVEALPSEKRLDSDGNRLSESELYN 154

Query: 148 EIIEKLQIVLPNLDSE-----MIRRKLSSETKFQW---LRRKLSPQQQKRI--LSFGLPG 197
             ++ +     N   +      +  +L++   F         L+  Q   I  +S  +PG
Sbjct: 155 NAVDSVPTSQLNYTEDEKKEIYLFSQLNAVGNFATGTIATDPLNDSQVAVIASISKEMPG 214

Query: 198 VGFRLEKSRFYPAASHASHV--------------------VGYVDIDNRGITGIEKFLDM 237
           +       R     S +S V                     GY   D  G + +EK  + 
Sbjct: 215 ISISTSWDRKILETSLSSIVGSVSSEKAGLPAEEAESYLKKGYSLNDRVGTSYLEKQYEE 274

Query: 238 QGLT---------------RVFTTNKGEKNLQPIRLALDLRIQNIVHQELVENKKKYNAE 282
                                    +     + I+L +DL  Q+ V   L          
Sbjct: 275 VLQGKRPVKEIHLDKHGDMESVENIEEGSKGKNIKLTIDLAFQDSVDALLKSYFNSELGN 334

Query: 283 SVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGW--------FNRISYGIFEMGSIFK 334
                     +  V ++   P      +  G K                  +F  GS+ K
Sbjct: 335 GG-----AKYSEGVYAVALNPQTGAVLSMSGLKHDLKTGELTPDSLGTVTNVFVPGSVVK 389

Query: 335 VFTIAMGIDSGLFTVKDLFDTRNPIKVGKHVIHDYHPQNRIL---TIPEIFRYSSNIGAA 391
             TI+ G ++G+ +       +  +  G   I+ ++         T  E   YSSN    
Sbjct: 390 AATISSGWENGVLSGNQTLTDQPIVFQGSAPIYSWYKLAYGSFPITAVEALEYSSNAYVV 449

Query: 392 QIAD------------------AMGIQGHKEFLYRLGLLSKLETELPEIQAPSYPSQWKR 433
           Q A                      +   +      GL S    +LP+      P ++  
Sbjct: 450 QTALGIMGQTYQPNMFVGTSNLESAMGKLRSTFGEYGLGSATGIDLPDESTGLVPKEYNF 509

Query: 434 IHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIR--------------SREESE 479
            + +T +FG   + TP+Q A   A + N G  + P  +                   +++
Sbjct: 510 ANFITNAFGQFDNYTPMQLAQYVATIANNGVRLAPHIVEGIYDNNDKGGLGELIQAIDTK 569

Query: 480 KVSRIVLKKNTVKTMRSLLREGVTG----GSGRRAF-VPGFEVGGKTGTAQKVIKKRYSD 534
           +++++ + ++ +  +     +   G     +GR         + GKTGT +  +      
Sbjct: 570 EINKVNISESDMAILHQGFYQVSHGTSPLTTGRAFSDGATVSISGKTGTGESYVAGGQEA 629

Query: 535 TLNFNSFLAVFPTTDPQYIVLSFMD 559
                + +A  PT +PQ  V     
Sbjct: 630 --TNTNAVAYAPTENPQIAVAVVFP 652