HHsearch alignment for GI: 254781106 and conserved domain: COG2002

>COG2002 AbrB Regulators of stationary/sporulation gene expression [Transcription].

Probab=94.33  E-value=0.044  Score=33.92  Aligned_cols=36  Identities=25%  Similarity=0.215  Sum_probs=26.4

Q ss_pred             CCCCEECCCCCEEECHHHHHHHHHCCCCCEEECCCC
Q ss_conf             112105676627107889999852489849951656
Q gi|254781106|r    7 NVTQKIDSKGRVSVPFVFRTILAQRCITDLYCFQDF   42 (145)
Q Consensus         7 ~~~~~lD~KGRi~iPa~fR~~L~~~~~~~lv~~~~~   42 (145)
T Consensus         5 ~~~~kV~~~GqIvIPkeiR~~lgi~~Gd~lei~~~~   40 (89)
T COG2002           5 MEVVKVDRKGQIVIPKEIREALGIKEGDVLEIIVDG   40 (89)
T ss_pred             EEEEEECCCCEEEEEHHHHHHCCCCCCCEEEEEEEC
T ss_conf             059998879659955999998399989989999947