HHsearch alignment for GI: 254781106 and conserved domain: COG2002

>COG2002 AbrB Regulators of stationary/sporulation gene expression [Transcription].

Probab=93.86  E-value=0.1  Score=31.68  Aligned_cols=38  Identities=29%  Similarity=0.489  Sum_probs=27.4

Q ss_pred             HHCCCCCCCEEECCHHHHHHCCCC-CE---EEEEECCCEEEE
Q ss_conf             112217861475198999870998-53---999941998996
Q gi|254781106|r   84 IFLKMDSEGRILMTDFIRVFTGIE-NE---VTFVGRGNYFQL  121 (145)
Q Consensus        84 ~~~~~D~~GRi~ip~~lr~~agi~-~e---v~~vG~g~~fEI  121 (145)
T Consensus         6 ~~~kV~~~GqIvIPkeiR~~lgi~~Gd~lei~~~~~~~~ivl   47 (89)
T COG2002           6 EVVKVDRKGQIVIPKEIREALGIKEGDVLEIIVDGDGGRIVL   47 (89)
T ss_pred             EEEEECCCCEEEEEHHHHHHCCCCCCCEEEEEEECCCCEEEE
T ss_conf             599988796599559999983999899899999478867999